Started by GitHub push by thvitt
Building remotely on <a href='/ci/computer/Rechenknecht' class='jenkins-table__link model-link model-link--float'>Rechenknecht</a> in workspace /mnt/data/jenkins/workspace/faust-macrogen
[ssh-agent] Looking for ssh-agent implementation...
[ssh-agent]   Exec ssh-agent (binary ssh-agent on a remote machine)
$ ssh-agent
SSH_AUTH_SOCK=/tmp/ssh-yS3kI95Lc2JT/agent.6570
SSH_AGENT_PID=6572
[ssh-agent] Started.
$ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_582543779554442176.key
Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_582543779554442176.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_582543779554442176.key)
[ssh-agent] Using credentials git
$ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_1225694269143901976.key
Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_1225694269143901976.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_1225694269143901976.key)
[ssh-agent] Using credentials jenkins (wrzh075.rzhousing.uni-wuerzburg.de)
 &gt; /usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 &gt; /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10
Fetching upstream changes from git://github.com/faustedition/faust-macrogen
 &gt; /usr/bin/git --version # timeout=10
using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de
 &gt; /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/*
 &gt; /usr/bin/git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 &gt; /usr/bin/git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision 44e44a8bb111f19af5ef8a6f338cd9db9ea138a0 (refs/remotes/origin/master)
 &gt; /usr/bin/git config core.sparsecheckout # timeout=10
 &gt; /usr/bin/git checkout -f 44e44a8bb111f19af5ef8a6f338cd9db9ea138a0
Commit message: "Improved table styling &amp; reporting"
 &gt; /usr/bin/git rev-list --no-walk 384b0f216aafbe4d38abb5bf1e4b459f308cbe60 # timeout=10
 &gt; /usr/bin/git remote # timeout=10
 &gt; /usr/bin/git submodule init # timeout=10
 &gt; /usr/bin/git submodule sync # timeout=10
 &gt; /usr/bin/git config --get remote.origin.url # timeout=10
 &gt; /usr/bin/git submodule init # timeout=10
 &gt; /usr/bin/git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 &gt; /usr/bin/git config --get submodule.data.url # timeout=10
 &gt; /usr/bin/git config -f .gitmodules --get submodule.data.path # timeout=10
 &gt; /usr/bin/git submodule update --init --recursive --remote data
$ bash -c "[ -d \$HOME/.pyenv ]"
$ bash -c "cd /mnt/data/jenkins/workspace/faust-macrogen &amp;&amp; env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv local 2&gt;/dev/null || true"
$ bash -c "mkdir \$HOME/.pyenv.lock"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv versions --bare"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv exec pip list"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "rm -rf \$HOME/.pyenv.lock"
[faust-macrogen] $ /bin/sh -xe /tmp/jenkins8036819884226548231.sh
+ pipenv install
Installing dependencies from Pipfile.lock (8f5326)...
To activate this project's virtualenv, run pipenv shell.
Alternatively, run a command inside the virtualenv with pipenv run.
+ pipenv run ./main.py
/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88
  return f(*args, **kwds)
<span style="color: #C4A000;">WARNING  datings  Skipping row ['Reference', 'Weight']: invalid literal for int() with base 10: 'Weight'</span>
<span style="color: #4E9A06;">INFO     datings  Reading data to build base graph ...</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.31_alpha (wa_faust: 2_II_H.31_)</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2_alpha (wa_faust: 2_III_H.2_)</span>
<span style="color: #CC0000;">ERROR    datings  Absolute dating without a date:
&lt;date xmlns="<a href='http://www.faustedition.net/ns'>http://www.faustedition.net/ns</a>" xmlns:xsi="<a href='http://www.w3.org/2001/XMLSchema-instance'>http://www.w3.org/2001/XMLSchema-instance</a>"&gt;
      &lt;comment&gt;Über Rest der Handschrift keine Aussage über Datierung möglich&lt;/comment&gt;
      &lt;source uri="faust://bibliography/bohnenkamp1994"&gt;S.322&lt;/source&gt;
      &lt;item uri="faust://inscription/wa/2_I_H.10/i_uebrige"/&gt;
   &lt;/date&gt;
   
 at data/xml/macrogenesis/handschriftendatierung_i.xml:115</span>
<span style="color: #CC0000;">ERROR    datings  Absolute dating without a date:
&lt;date xmlns="<a href='http://www.faustedition.net/ns'>http://www.faustedition.net/ns</a>" xmlns:xsi="<a href='http://www.w3.org/2001/XMLSchema-instance'>http://www.w3.org/2001/XMLSchema-instance</a>"&gt;
      &lt;comment&gt;Über Rest der Handschrift keine Aussage über Datierung möglich&lt;/comment&gt;
      &lt;source uri="faust://bibliography/bohnenkamp1994"&gt;S.322&lt;/source&gt;
      &lt;item uri="faust://inscription/wa/2_I_H.10/i_v"/&gt;
   &lt;/date&gt;
   
 at data/xml/macrogenesis/handschriftendatierung_i.xml:121</span>
<span style="color: #CC0000;">ERROR    datings  Backwards dating (1827-12-25 .. 1817-12-25), this would have caused a conflict:
&lt;date xmlns="<a href='http://www.faustedition.net/ns'>http://www.faustedition.net/ns</a>" xmlns:xsi="<a href='http://www.w3.org/2001/XMLSchema-instance'>http://www.w3.org/2001/XMLSchema-instance</a>" notBefore="1827-12-25" notAfter="1817-12-25"&gt;
      &lt;comment&gt;Datierung auf HS: Weynachten 1827; Am 25.12.1827 . . &lt;/comment&gt;
      &lt;source uri="faust://bibliography/gsa-datenbank"/&gt;
      &lt;item uri="faust://document/wa/2_I_H.f"/&gt;
   &lt;/date&gt;
   
 at data/xml/macrogenesis/handschriftendatierung_i.xml:663</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.IIIalpha (2 III H.3a: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.IIIalpha (2 III H.3a: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))</span>
<span style="color: #C4A000;">WARNING  uris     Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P22 from inscription H P22 i_2_o</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 III H.3a:2 from ambiguous ref 2 III H.3a: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 III H.3a:1 from ambiguous ref 2 III H.3a: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 1 H.10 from inscription 1 H.10 i_uebrige</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 I H.12:2 from ambiguous ref 2 I H.12: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 I H.12:1 from ambiguous ref 2 I H.12: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P22 from inscription H P22 i_1_o</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 IV H.22f from ambiguous ref 2 IV H.22 … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 IV H.22e from ambiguous ref 2 IV H.22 … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 II H.27:1 from ambiguous ref 2 II H.27: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 II H.2:3 from ambiguous ref 2 II H.2: … (3)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 II H.2:2 from ambiguous ref 2 II H.2: … (3)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 II H.2:1 from ambiguous ref 2 II H.2: … (3)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P176 Var from inscription H P176 Var i_r</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 V H.12:2 from ambiguous ref 2 V H.12: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 V H.12:1 from ambiguous ref 2 V H.12: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted C.3 12 from ambiguous ref C.3  … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted C.3 4 from ambiguous ref C.3  … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 IV H.19 from inscription 2 IV H.19 i_uebrige</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 V H.37e from ambiguous ref 2 V H.37 … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 V H.37f from ambiguous ref 2 V H.37 … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 III H.6:1 from ambiguous ref 2 III H.6: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P22 from inscription H P22 i_2_u</span>
<span style="color: #4E9A06;">INFO     graph    Adopted C.1 4 from ambiguous ref C.1  … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted C.1 12 from ambiguous ref C.1  … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P167 from inscription H P167 i_v</span>
<span style="color: #4E9A06;">INFO     graph    Adopted C.3 12 from ambiguous ref C.3  … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted C.3 4 from ambiguous ref C.3  … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 IV H.6:1 from ambiguous ref 2 IV H.6: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 IV H.6:2 from ambiguous ref 2 IV H.6: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 I H.9 from ambiguous ref 2 I H.9 … (3)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 I H.9a from ambiguous ref 2 I H.9 … (3)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 I H.9b from ambiguous ref 2 I H.9 … (3)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P167 from inscription H P167 i_uebrige</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 III H.2:2 from ambiguous ref 2 III H.2: … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P22 from inscription H P22 i_uebrige</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 III H.7:2 from ambiguous ref 2 III H.7: … (5)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 V H.15b from ambiguous ref 2 V H.15 … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted 2 V H.15a from ambiguous ref 2 V H.15 … (2)</span>
<span style="color: #4E9A06;">INFO     graph    Adopted H P167 from inscription H P167 i_r_u</span>
<span style="color: #4E9A06;">INFO     graph    Removing hertz and temp-syn</span>
<span style="color: #D3D7CF;">DEBUG    graph    Adding 108 otherwise unmentioned witnesses to the working graph</span>
<span style="color: #4E9A06;">INFO     graph    Extracted 5 subgraphs with conflicts</span>
<span style="color: #4E9A06;">INFO     graph    Calculating minimum feedback arc set for 5 subgraphs</span>
<span style="color: #D3D7CF;">DEBUG    graph    Calculating MFAS for a 2-node graph using ip, may take a while</span>
<span style="color: #D3D7CF;">DEBUG    graph    1 edges to remove</span>
<span style="color: #D3D7CF;">DEBUG    graph    Calculating MFAS for a 3-node graph using ip, may take a while</span>
<span style="color: #D3D7CF;">DEBUG    graph    2 edges to remove</span>
<span style="color: #D3D7CF;">DEBUG    graph    Calculating MFAS for a 4-node graph using ip, may take a while</span>
<span style="color: #D3D7CF;">DEBUG    graph    2 edges to remove</span>
<span style="color: #D3D7CF;">DEBUG    graph    Calculating MFAS for a 55-node graph using eades, may take a while</span>
<span style="color: #D3D7CF;">DEBUG    graph    11 edges to remove</span>
<span style="color: #D3D7CF;">DEBUG    graph    Calculating MFAS for a 694-node graph using eades, may take a while</span>
<span style="color: #D3D7CF;">DEBUG    graph    333 edges to remove</span>
<span style="color: #C4A000;">WARNING  graph    Found 17 self loops, will also remove those. Affected nodes: 2 III H.50c, 2 III H.50c, 2 III H.3a: … (2), 2 III H.3a: … (2), 2 III H.76, 2 III H.76, 2 II H.22, 2 II H.22, fischer_lamberg: 2_III_H.15 , fischer_lamberg: 2_III_H.15 , 2 III H.2: … (2), 2 III H.2: … (2), 2 III H.2: … (2), 2 III H.2: … (2), 2 III H.70, 2 III H.70, 2 III H.70</span>
<span style="color: #4E9A06;">INFO     graph    Marking 366 conflicting edges for deletion</span>
<span style="color: #4E9A06;">INFO     graph    Building DAG from remaining data</span>
<span style="color: #4E9A06;">INFO     graph    Removed 366 of the original 3186 edges</span>
<span style="color: #4E9A06;">INFO     graph    Augmenting refs with data from graphs</span>
<span style="color: #4E9A06;">INFO     graph    Creating sort order from DAG</span>
Traceback (most recent call last):
  File "./main.py", line 31, in &lt;module&gt;
    _main()
  File "./main.py", line 17, in _main
    report.write_order_xml(graphs)
  File "/mnt/data/jenkins/workspace/faust-macrogen/report.py", line 501, in write_order_xml
    root.getroottree().write(str(target / 'order.xml'), pretty_print=True)
  File "src/lxml/etree.pyx", line 2039, in lxml.etree._ElementTree.write
  File "src/lxml/serializer.pxi", line 721, in lxml.etree._tofilelike
  File "src/lxml/serializer.pxi", line 780, in lxml.etree._create_output_buffer
  File "src/lxml/serializer.pxi", line 770, in lxml.etree._create_output_buffer
FileNotFoundError: [Errno 2] No such file or directory
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 6572 killed;
[ssh-agent] Stopped.
Archiving artifacts
[BFA] Scanning build for known causes...
[BFA] No failure causes found
[BFA] Done. 0s
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
Finished: FAILURE