Started by user Thorsten Vitt
Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/DARIAH-Topics
Cloning the remote Git repository
Cloning repository https://github.com/DARIAH-DE/Topics
> git init /mnt/data/jenkins/workspace/DARIAH-Topics # timeout=10
Fetching upstream changes from https://github.com/DARIAH-DE/Topics
> git --version # timeout=10
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/DARIAH-DE/Topics +refs/heads/*:refs/remotes/origin/*
> git config remote.origin.url https://github.com/DARIAH-DE/Topics # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/DARIAH-DE/Topics # timeout=10
Fetching upstream changes from https://github.com/DARIAH-DE/Topics
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/DARIAH-DE/Topics +refs/heads/*:refs/remotes/origin/*
> git rev-parse refs/remotes/origin/testing^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/testing^{commit} # timeout=10
Checking out Revision 7184211b5dad1a9970927e1f9405c972b8422d7c (refs/remotes/origin/testing)
> git config core.sparsecheckout # timeout=10
> git checkout -f 7184211b5dad1a9970927e1f9405c972b8422d7c
First time build. Skipping changelog.
[DARIAH-Topics] $ /usr/bin/python3 /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenv.py /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9
Using base prefix '/usr'
New python executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python3
Also creating executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python
Installing setuptools, pip, wheel...done.
[DARIAH-Topics] $ /bin/sh -xe /tmp/shiningpanda8584732416718152887.sh
+ pip install -U pip
Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages
+ pip install -U -r requirements-dev.txt
Obtaining file:///mnt/data/jenkins/workspace/DARIAH-Topics (from -r requirements.txt (line 1))
Collecting nose (from -r requirements-dev.txt (line 2))
Downloading nose-1.3.7-py3-none-any.whl (154kB)
Collecting nosexcover (from -r requirements-dev.txt (line 3))
Downloading nosexcover-1.0.11-py2.py3-none-any.whl
Collecting jupyter (from -r requirements-dev.txt (line 4))
Downloading jupyter-1.0.0-py2.py3-none-any.whl
Collecting pandas>=0.19.2 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading pandas-0.19.2-cp35-cp35m-manylinux1_x86_64.whl (18.5MB)
Collecting regex>=2017.01.14 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading regex-2017.01.17.tar.gz (601kB)
Collecting gensim>=0.13.2 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading gensim-0.13.4.1.tar.gz (7.5MB)
Collecting matplotlib==1.5.3 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading matplotlib-1.5.3-cp35-cp35m-manylinux1_x86_64.whl (13.7MB)
Collecting numpy>=1.3 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading numpy-1.12.0-cp35-cp35m-manylinux1_x86_64.whl (16.8MB)
Collecting scipy>=0.7 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading scipy-0.18.1-cp35-cp35m-manylinux1_x86_64.whl (42.0MB)
Collecting werkzeug>=0.11.15 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading Werkzeug-0.11.15-py2.py3-none-any.whl (307kB)
Collecting flask>=0.11.1 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading Flask-0.12-py2.py3-none-any.whl (82kB)
Collecting pyLDAvis>=2.0.0 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading pyLDAvis-2.1.0.tar.gz (2.2MB)
Collecting coverage>=3.4 (from nosexcover->-r requirements-dev.txt (line 3))
Downloading coverage-4.3.4-cp35-cp35m-manylinux1_x86_64.whl (191kB)
Collecting jupyter-console (from jupyter->-r requirements-dev.txt (line 4))
Downloading jupyter_console-5.0.0-py2.py3-none-any.whl
Collecting ipywidgets (from jupyter->-r requirements-dev.txt (line 4))
Downloading ipywidgets-5.2.2-py2.py3-none-any.whl (43kB)
Collecting notebook (from jupyter->-r requirements-dev.txt (line 4))
Downloading notebook-4.3.1-py2.py3-none-any.whl (6.8MB)
Collecting qtconsole (from jupyter->-r requirements-dev.txt (line 4))
Downloading qtconsole-4.2.1-py2.py3-none-any.whl (104kB)
Collecting nbconvert (from jupyter->-r requirements-dev.txt (line 4))
Downloading nbconvert-5.1.1-py2.py3-none-any.whl (372kB)
Collecting ipykernel (from jupyter->-r requirements-dev.txt (line 4))
Downloading ipykernel-4.5.2-py2.py3-none-any.whl (98kB)
Collecting pytz>=2011k (from pandas>=0.19.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading pytz-2016.10-py2.py3-none-any.whl (483kB)
Collecting python-dateutil>=2 (from pandas>=0.19.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading python_dateutil-2.6.0-py2.py3-none-any.whl (194kB)
Collecting six>=1.5.0 (from gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading six-1.10.0-py2.py3-none-any.whl
Collecting smart_open>=1.2.1 (from gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading smart_open-1.3.5.tar.gz
Collecting pyparsing!=2.0.0,!=2.0.4,!=2.1.2,>=1.5.6 (from matplotlib==1.5.3->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading pyparsing-2.1.10-py2.py3-none-any.whl (56kB)
Collecting cycler (from matplotlib==1.5.3->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading cycler-0.10.0-py2.py3-none-any.whl
Collecting click>=2.0 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading click-6.7-py2.py3-none-any.whl (71kB)
Collecting itsdangerous>=0.21 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading itsdangerous-0.24.tar.gz (46kB)
Collecting Jinja2>=2.4 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading Jinja2-2.9.4-py2.py3-none-any.whl (274kB)
Requirement already up-to-date: wheel>=0.23.0 in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages (from pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Collecting joblib>=0.8.4 (from pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading joblib-0.10.3-py2.py3-none-any.whl (166kB)
Collecting numexpr (from pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading numexpr-2.6.1-cp35-cp35m-manylinux1_x86_64.whl (388kB)
Collecting pytest (from pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading pytest-3.0.6-py2.py3-none-any.whl (172kB)
Collecting future (from pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading future-0.16.0.tar.gz (824kB)
Collecting funcy (from pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading funcy-1.7.2.tar.gz
Collecting ipython (from jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading ipython-5.1.0-py3-none-any.whl (747kB)
Collecting jupyter-client (from jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading jupyter_client-4.4.0-py2.py3-none-any.whl (76kB)
Collecting pygments (from jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading Pygments-2.2.0-py2.py3-none-any.whl (841kB)
Collecting prompt-toolkit<2.0.0,>=1.0.0 (from jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading prompt_toolkit-1.0.9-py3-none-any.whl (241kB)
Collecting traitlets>=4.2.1 (from ipywidgets->jupyter->-r requirements-dev.txt (line 4))
Downloading traitlets-4.3.1-py2.py3-none-any.whl (74kB)
Collecting widgetsnbextension>=1.2.6 (from ipywidgets->jupyter->-r requirements-dev.txt (line 4))
Downloading widgetsnbextension-1.2.6-py2.py3-none-any.whl (1.5MB)
Collecting ipython-genutils (from notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading ipython_genutils-0.1.0-py2.py3-none-any.whl
Collecting terminado>=0.3.3; sys_platform != "win32" (from notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading terminado-0.6.tar.gz
Collecting nbformat (from notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading nbformat-4.2.0-py2.py3-none-any.whl (153kB)
Collecting jupyter-core (from notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading jupyter_core-4.2.1-py2.py3-none-any.whl (125kB)
Collecting tornado>=4 (from notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading tornado-4.4.2.tar.gz (460kB)
Collecting pandocfilters>=1.4.1 (from nbconvert->jupyter->-r requirements-dev.txt (line 4))
Downloading pandocfilters-1.4.1.tar.gz
Collecting testpath (from nbconvert->jupyter->-r requirements-dev.txt (line 4))
Downloading testpath-0.3-py2.py3-none-any.whl (82kB)
Collecting mistune!=0.6 (from nbconvert->jupyter->-r requirements-dev.txt (line 4))
Downloading mistune-0.7.3-py2.py3-none-any.whl
Collecting entrypoints>=0.2.2 (from nbconvert->jupyter->-r requirements-dev.txt (line 4))
Downloading entrypoints-0.2.2-py2.py3-none-any.whl
Collecting bleach (from nbconvert->jupyter->-r requirements-dev.txt (line 4))
Downloading bleach-1.5.0-py2.py3-none-any.whl
Collecting boto>=2.32 (from smart_open>=1.2.1->gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading boto-2.45.0-py2.py3-none-any.whl (1.3MB)
Collecting bz2file (from smart_open>=1.2.1->gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading bz2file-0.98.tar.gz
Collecting requests (from smart_open>=1.2.1->gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading requests-2.12.5-py2.py3-none-any.whl (576kB)
Collecting MarkupSafe>=0.23 (from Jinja2>=2.4->flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading MarkupSafe-0.23.tar.gz
Requirement already up-to-date: setuptools in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages (from pytest->pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Collecting py>=1.4.29 (from pytest->pyLDAvis>=2.0.0->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1))
Downloading py-1.4.32-py2.py3-none-any.whl (82kB)
Collecting simplegeneric>0.8 (from ipython->jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading simplegeneric-0.8.1.zip
Collecting decorator (from ipython->jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading decorator-4.0.11-py2.py3-none-any.whl
Collecting pexpect; sys_platform != "win32" (from ipython->jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading pexpect-4.2.1-py2.py3-none-any.whl (55kB)
Collecting pickleshare (from ipython->jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading pickleshare-0.7.4-py2.py3-none-any.whl
Collecting pyzmq>=13 (from jupyter-client->jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading pyzmq-16.0.2-cp35-cp35m-manylinux1_x86_64.whl (3.0MB)
Collecting wcwidth (from prompt-toolkit<2.0.0,>=1.0.0->jupyter-console->jupyter->-r requirements-dev.txt (line 4))
Downloading wcwidth-0.1.7-py2.py3-none-any.whl
Collecting ptyprocess (from terminado>=0.3.3; sys_platform != "win32"->notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading ptyprocess-0.5.1-py2.py3-none-any.whl
Collecting jsonschema!=2.5.0,>=2.4 (from nbformat->notebook->jupyter->-r requirements-dev.txt (line 4))
Downloading jsonschema-2.5.1-py2.py3-none-any.whl
Collecting html5lib!=0.9999,!=0.99999,<0.99999999,>=0.999 (from bleach->nbconvert->jupyter->-r requirements-dev.txt (line 4))
Downloading html5lib-0.9999999.tar.gz (889kB)
Building wheels for collected packages: regex, gensim, pyLDAvis, smart-open, itsdangerous, future, funcy, terminado, tornado, pandocfilters, bz2file, MarkupSafe, simplegeneric, html5lib
Running setup.py bdist_wheel for regex: started
Running setup.py bdist_wheel for regex: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/e3/54/f6/9cba8c2e34f051e084a3369ce79fc4c8420561a1ebc99e38f2
Running setup.py bdist_wheel for gensim: started
Running setup.py bdist_wheel for gensim: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/dd/b6/d9/14ef0ec4f988b195d2ddd538ac21f8424d3604dd834cd4d77a
Running setup.py bdist_wheel for pyLDAvis: started
Running setup.py bdist_wheel for pyLDAvis: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/5f/0c/b3/f8ead492f61e80139043b4b881e3f52757883385244a61c651
Running setup.py bdist_wheel for smart-open: started
Running setup.py bdist_wheel for smart-open: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/a6/61/e5/74ff1f24ad225557675acc0cc2ccb196d7b83c1eb7d80390c8
Running setup.py bdist_wheel for itsdangerous: started
Running setup.py bdist_wheel for itsdangerous: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/fc/a8/66/24d655233c757e178d45dea2de22a04c6d92766abfb741129a
Running setup.py bdist_wheel for future: started
Running setup.py bdist_wheel for future: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/c2/50/7c/0d83b4baac4f63ff7a765bd16390d2ab43c93587fac9d6017a
Running setup.py bdist_wheel for funcy: started
Running setup.py bdist_wheel for funcy: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/6d/bd/b2/6d00f1a710d381a51c483ffcd596b5bc695a6908e917286817
Running setup.py bdist_wheel for terminado: started
Running setup.py bdist_wheel for terminado: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/3b/c2/ea/af635ffb63857a8c2ddd22da6a4b52f5b7ea3065db94ef5d7c
Running setup.py bdist_wheel for tornado: started
Running setup.py bdist_wheel for tornado: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/b3/db/47/46e05d1ee3ecfba252fcab42f0a156dab0df0cddf99fa0827c
Running setup.py bdist_wheel for pandocfilters: started
Running setup.py bdist_wheel for pandocfilters: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/d4/01/68/49055c80b9f01ccb49241e73c8019628605064730941d70b56
Running setup.py bdist_wheel for bz2file: started
Running setup.py bdist_wheel for bz2file: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/31/9c/20/996d65ca104cbca940b1b053299b68459391c01c774d073126
Running setup.py bdist_wheel for MarkupSafe: started
Running setup.py bdist_wheel for MarkupSafe: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/a3/fa/dc/0198eed9ad95489b8a4f45d14dd5d2aee3f8984e46862c5748
Running setup.py bdist_wheel for simplegeneric: started
Running setup.py bdist_wheel for simplegeneric: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/7b/31/08/c85e74c84188cbec6a6827beec4d640f2bd78ae003dc1ec09d
Running setup.py bdist_wheel for html5lib: started
Running setup.py bdist_wheel for html5lib: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/6f/85/6c/56b8e1292c6214c4eb73b9dda50f53e8e977bf65989373c962
Successfully built regex gensim pyLDAvis smart-open itsdangerous future funcy terminado tornado pandocfilters bz2file MarkupSafe simplegeneric html5lib
Installing collected packages: nose, coverage, nosexcover, wcwidth, six, prompt-toolkit, simplegeneric, decorator, ptyprocess, pexpect, ipython-genutils, traitlets, pickleshare, pygments, ipython, pyzmq, jupyter-core, jupyter-client, tornado, ipykernel, jupyter-console, MarkupSafe, Jinja2, terminado, jsonschema, nbformat, pandocfilters, testpath, mistune, entrypoints, html5lib, bleach, nbconvert, notebook, widgetsnbextension, ipywidgets, qtconsole, jupyter, numpy, pytz, python-dateutil, pandas, regex, scipy, boto, bz2file, requests, smart-open, gensim, pyparsing, cycler, matplotlib, werkzeug, click, itsdangerous, flask, joblib, numexpr, py, pytest, future, funcy, pyLDAvis, dariah-topics
Running setup.py develop for dariah-topics
Successfully installed Jinja2-2.9.4 MarkupSafe-0.23 bleach-1.5.0 boto-2.45.0 bz2file-0.98 click-6.7 coverage-4.3.4 cycler-0.10.0 dariah-topics decorator-4.0.11 entrypoints-0.2.2 flask-0.12 funcy-1.7.2 future-0.16.0 gensim-0.13.4.1 html5lib-0.9999999 ipykernel-4.5.2 ipython-5.1.0 ipython-genutils-0.1.0 ipywidgets-5.2.2 itsdangerous-0.24 joblib-0.10.3 jsonschema-2.5.1 jupyter-1.0.0 jupyter-client-4.4.0 jupyter-console-5.0.0 jupyter-core-4.2.1 matplotlib-1.5.3 mistune-0.7.3 nbconvert-5.1.1 nbformat-4.2.0 nose-1.3.7 nosexcover-1.0.11 notebook-4.3.1 numexpr-2.6.1 numpy-1.12.0 pandas-0.19.2 pandocfilters-1.4.1 pexpect-4.2.1 pickleshare-0.7.4 prompt-toolkit-1.0.9 ptyprocess-0.5.1 py-1.4.32 pyLDAvis-2.1.0 pygments-2.2.0 pyparsing-2.1.10 pytest-3.0.6 python-dateutil-2.6.0 pytz-2016.10 pyzmq-16.0.2 qtconsole-4.2.1 regex-2017.1.17 requests-2.12.5 scipy-0.18.1 simplegeneric-0.8.1 six-1.10.0 smart-open-1.3.5 terminado-0.6 testpath-0.3 tornado-4.4.2 traitlets-4.3.1 wcwidth-0.1.7 werkzeug-0.11.15 widgetsnbextension-1.2.6
+ ./setup.py sdist bdist_wheel
running sdist
running egg_info
writing dariah_topics.egg-info/PKG-INFO
writing requirements to dariah_topics.egg-info/requires.txt
writing dependency_links to dariah_topics.egg-info/dependency_links.txt
writing top-level names to dariah_topics.egg-info/top_level.txt
reading manifest file 'dariah_topics.egg-info/SOURCES.txt'
writing manifest file 'dariah_topics.egg-info/SOURCES.txt'
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/setuptools/dist.py:333: UserWarning: Normalizing '0.2.0dev0' to '0.2.0.dev0'
normalized_version,
warning: sdist: standard file not found: should have one of README, README.rst, README.txt
running check
warning: check: missing required meta-data: url
creating dariah_topics-0.2.0.dev0
creating dariah_topics-0.2.0.dev0/dariah_topics
creating dariah_topics-0.2.0.dev0/dariah_topics.egg-info
copying files to dariah_topics-0.2.0.dev0...
copying setup.cfg -> dariah_topics-0.2.0.dev0
copying setup.py -> dariah_topics-0.2.0.dev0
copying dariah_topics/__init__.py -> dariah_topics-0.2.0.dev0/dariah_topics
copying dariah_topics/mallet.py -> dariah_topics-0.2.0.dev0/dariah_topics
copying dariah_topics/model_creation.py -> dariah_topics-0.2.0.dev0/dariah_topics
copying dariah_topics/preprocessing.py -> dariah_topics-0.2.0.dev0/dariah_topics
copying dariah_topics/visualization.py -> dariah_topics-0.2.0.dev0/dariah_topics
copying dariah_topics.egg-info/PKG-INFO -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/SOURCES.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/dependency_links.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/requires.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/top_level.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info
Writing dariah_topics-0.2.0.dev0/setup.cfg
creating dist
Creating tar archive
removing 'dariah_topics-0.2.0.dev0' (and everything under it)
running bdist_wheel
running build
running build_py
creating build
creating build/lib
creating build/lib/dariah_topics
copying dariah_topics/preprocessing.py -> build/lib/dariah_topics
copying dariah_topics/visualization.py -> build/lib/dariah_topics
copying dariah_topics/model_creation.py -> build/lib/dariah_topics
copying dariah_topics/__init__.py -> build/lib/dariah_topics
copying dariah_topics/mallet.py -> build/lib/dariah_topics
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/preprocessing.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/visualization.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/model_creation.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/__init__.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/mallet.py -> build/bdist.linux-x86_64/wheel/dariah_topics
running install_egg_info
Copying dariah_topics.egg-info to build/bdist.linux-x86_64/wheel/dariah_topics-0.2.0.dev0-py3.5.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/dariah_topics-0.2.0.dev0.dist-info/WHEEL
+ nosetests
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment.
warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.')
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment.
warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.')
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/funcy/decorators.py:56: DeprecationWarning: inspect.getargspec() is deprecated, use inspect.signature() instead
spec = inspect.getargspec(func)
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/funcy/decorators.py:56: DeprecationWarning: inspect.getargspec() is deprecated, use inspect.signature() instead
spec = inspect.getargspec(func)
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/funcy/decorators.py:56: DeprecationWarning: inspect.getargspec() is deprecated, use inspect.signature() instead
spec = inspect.getargspec(func)
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/funcy/decorators.py:56: DeprecationWarning: inspect.getargspec() is deprecated, use inspect.signature() instead
spec = inspect.getargspec(func)
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/funcy/decorators.py:56: DeprecationWarning: inspect.getargspec() is deprecated, use inspect.signature() instead
spec = inspect.getargspec(func)
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/funcy/decorators.py:56: DeprecationWarning: inspect.getargspec() is deprecated, use inspect.signature() instead
spec = inspect.getargspec(func)
.[NbConvertApp] Converting notebook IntegrationTest_v01.ipynb to html
[NbConvertApp] Executing notebook with kernel: python3
Traceback (most recent call last):
File "/usr/lib/python3.5/runpy.py", line 183, in _run_module_as_main
mod_name, mod_spec, code = _get_module_details(mod_name, _Error)
File "/usr/lib/python3.5/runpy.py", line 142, in _get_module_details
return _get_module_details(pkg_main_name, error)
File "/usr/lib/python3.5/runpy.py", line 109, in _get_module_details
__import__(pkg_name)
File "/usr/lib/python3/dist-packages/ipykernel/__init__.py", line 2, in <module>
from .connect import *
File "/usr/lib/python3/dist-packages/ipykernel/connect.py", line 14, in <module>
from IPython.paths import get_ipython_dir
ImportError: No module named 'IPython.paths'
Traceback (most recent call last):
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/jupyter-nbconvert", line 11, in <module>
sys.exit(main())
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/jupyter_core/application.py", line 267, in launch_instance
return super(JupyterApp, cls).launch_instance(argv=argv, **kwargs)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/traitlets/config/application.py", line 658, in launch_instance
app.start()
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/nbconvertapp.py", line 305, in start
self.convert_notebooks()
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/nbconvertapp.py", line 473, in convert_notebooks
self.convert_single_notebook(notebook_filename)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/nbconvertapp.py", line 444, in convert_single_notebook
output, resources = self.export_single_notebook(notebook_filename, resources, input_buffer=input_buffer)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/nbconvertapp.py", line 373, in export_single_notebook
output, resources = self.exporter.from_filename(notebook_filename, resources=resources)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 171, in from_filename
return self.from_file(f, resources=resources, **kw)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 189, in from_file
return self.from_notebook_node(nbformat.read(file_stream, as_version=4), resources=resources, **kw)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/html.py", line 69, in from_notebook_node
return super(HTMLExporter, self).from_notebook_node(nb, resources, **kw)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/templateexporter.py", line 236, in from_notebook_node
nb_copy, resources = super(TemplateExporter, self).from_notebook_node(nb, resources, **kw)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 131, in from_notebook_node
nb_copy, resources = self._preprocess(nb_copy, resources)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 308, in _preprocess
nbc, resc = preprocessor(nbc, resc)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/base.py", line 47, in __call__
return self.preprocess(nb,resources)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/execute.py", line 207, in preprocess
cwd=path)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/execute.py", line 192, in start_new_kernel
kc.wait_for_ready(timeout=startup_timeout)
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/jupyter_client/blocking/client.py", line 59, in wait_for_ready
raise RuntimeError('Kernel died before replying to kernel_info')
RuntimeError: Kernel died before replying to kernel_info
E..
======================================================================
ERROR: Tries to run the integration test notebook using jupyter.
----------------------------------------------------------------------
Traceback (most recent call last):
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nose/case.py", line 198, in runTest
self.test(*self.arg)
File "/mnt/data/jenkins/workspace/DARIAH-Topics/test/integration_test.py", line 11, in jupyter_integration_test
"IntegrationTest_v01.ipynb"])
File "/usr/lib/python3.5/subprocess.py", line 271, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['jupyter-nbconvert', '--execute', 'IntegrationTest_v01.ipynb']' returned non-zero exit status 1
Name Stmts Miss Cover
-----------------------------------------------------
dariah_topics.py 0 0 100%
dariah_topics/mallet.py 26 11 58%
dariah_topics/model_creation.py 60 43 28%
dariah_topics/preprocessing.py 117 71 39%
dariah_topics/visualization.py 113 89 21%
-----------------------------------------------------
TOTAL 316 214 32%
----------------------------------------------------------------------
Ran 4 tests in 7.141s
FAILED (errors=1)
Build step 'Virtualenv Builder' marked build as failure
Recording test results
Skipping Cobertura coverage report as build was not UNSTABLE or better ...
An attempt to send an e-mail to empty list of recipients, ignored.
[Set GitHub commit status (universal)] PENDING on repos [GHRepository@2b7c6ecb[description=<null>,homepage=<null>,name=Topics,license=<null>,fork=true,size=19615,milestones={},language=Jupyter Notebook,commits={},url=https://api.github.com/repos/DARIAH-DE/Topics,id=69341969]] (sha:7184211) with context:DARIAH-Topics
Setting commit status on GitHub for https://github.com/DARIAH-DE/Topics/commit/7184211b5dad1a9970927e1f9405c972b8422d7c
[BFA] Scanning build for known causes...
[BFA] No failure causes found
[BFA] Done. 0s
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
Finished: FAILURE
[BFA] Scanning build for known causes...
[BFA] Found failure cause(s):
[BFA] Jupyter Setup Problem
[BFA] Done. 0s