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Started by user Thorsten Vitt Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/faust-macrogen [ssh-agent] Looking for ssh-agent implementation... [ssh-agent] Exec ssh-agent (binary ssh-agent on a remote machine) $ ssh-agent SSH_AUTH_SOCK=/tmp/ssh-hyPOoxwicNwf/agent.19396 SSH_AGENT_PID=19398 [ssh-agent] Started. $ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_5758834341068485806.key Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_5758834341068485806.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_5758834341068485806.key) [ssh-agent] Using credentials git $ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_2850392768807835116.key Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_2850392768807835116.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_2850392768807835116.key) [ssh-agent] Using credentials jenkins (wrzh075.rzhousing.uni-wuerzburg.de) Cloning the remote Git repository Cloning repository git://github.com/faustedition/faust-macrogen > /usr/bin/git init /mnt/data/jenkins/workspace/faust-macrogen # timeout=10 Fetching upstream changes from git://github.com/faustedition/faust-macrogen > /usr/bin/git --version # timeout=10 using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de > /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/* > /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10 > /usr/bin/git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10 Fetching upstream changes from git://github.com/faustedition/faust-macrogen using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de > /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/* > /usr/bin/git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > /usr/bin/git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10 Checking out Revision b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e (refs/remotes/origin/master) > /usr/bin/git config core.sparsecheckout # timeout=10 > /usr/bin/git checkout -f b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e Commit message: "Improved report pages" > /usr/bin/git rev-list --no-walk b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e # timeout=10 $ bash -c "[ -d \$HOME/.pyenv ]" $ bash -c "cd /mnt/data/jenkins/workspace/faust-macrogen && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true" $ bash -c "mkdir \$HOME/.pyenv.lock" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv versions --bare" Updating pyenv... $ bash -c "cd \$HOME/.pyenv && git checkout master && git pull" Already on 'master' Your branch is up to date with 'origin/master'. From https://github.com/yyuu/pyenv 8eeddae..97f244f master -> origin/master * [new tag] v1.2.6 -> v1.2.6 * [new tag] v1.2.5 -> v1.2.5 Updating 8eeddae..97f244f Fast-forward .github/PULL_REQUEST_TEMPLATE.md | 6 +++--- CHANGELOG.md | 12 ++++++++++++ libexec/pyenv---version | 2 +- libexec/pyenv-rehash | 2 +- plugins/python-build/bin/python-build | 13 +++++-------- .../share/python-build/{3.7.0b5 => 3.6.6} | 4 ++-- .../share/python-build/{3.5.5rc1 => 3.6.6rc1} | 4 ++-- plugins/python-build/share/python-build/3.7.0 | 8 ++++++++ .../python-build/share/python-build/anaconda2-5.2.0 | 19 +++++++++++++++++++ .../python-build/share/python-build/anaconda3-5.2.0 | 19 +++++++++++++++++++ 10 files changed, 72 insertions(+), 17 deletions(-) rename plugins/python-build/share/python-build/{3.7.0b5 => 3.6.6} (51%) rename plugins/python-build/share/python-build/{3.5.5rc1 => 3.6.6rc1} (50%) create mode 100644 plugins/python-build/share/python-build/3.7.0 create mode 100644 plugins/python-build/share/python-build/anaconda2-5.2.0 create mode 100644 plugins/python-build/share/python-build/anaconda3-5.2.0 Updated pyenv. Installing 3.6.6... $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv install 3.6.6" Downloading Python-3.6.6.tar.xz... -> https://www.python.org/ftp/python/3.6.6/Python-3.6.6.tar.xz Installing Python-3.6.6... Installed Python-3.6.6 to /mnt/data/jenkins/.pyenv/versions/3.6.6 Installed 3.6.6. $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv exec pip list" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "rm -rf \$HOME/.pyenv.lock" [faust-macrogen] $ /bin/sh -xe /tmp/jenkins4824261211888107503.sh + pipenv install Creating a virtualenv for this project… Using /mnt/data/jenkins/.pyenv/versions/3.6.6/bin/python3.6m (3.6.6) to create virtualenv… Running virtualenv with interpreter /mnt/data/jenkins/.pyenv/versions/3.6.6/bin/python3.6m Using base prefix '/mnt/data/jenkins/.pyenv/versions/3.6.6' New python executable in /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/bin/python3.6m Also creating executable in /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/bin/python Installing setuptools, pip, wheel...done. Virtualenv location: /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf Installing dependencies from Pipfile.lock (8f5326)… To activate this project's virtualenv, run the following: $ pipenv shell + pipenv run ./main.py /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88 return f(*args, **kwds) [33mWARNING datings Skipping row ['Reference', 'Weight']: invalid literal for int() with base 10: 'Weight'[0m Traceback (most recent call last): File "./main.py", line 6, in <module> import graph File "/mnt/data/jenkins/workspace/faust-macrogen/graph.py", line 12, in <module> from datings import base_graph File "/mnt/data/jenkins/workspace/faust-macrogen/datings.py", line 68, in <module> _bib_db = _parse_bibliography('bibliography.xml') File "/mnt/data/jenkins/workspace/faust-macrogen/datings.py", line 44, in _parse_bibliography et = etree.parse(url) File "src/lxml/etree.pyx", line 3426, in lxml.etree.parse File "src/lxml/parser.pxi", line 1840, in lxml.etree._parseDocument File "src/lxml/parser.pxi", line 1866, in lxml.etree._parseDocumentFromURL File "src/lxml/parser.pxi", line 1770, in lxml.etree._parseDocFromFile File "src/lxml/parser.pxi", line 1163, in lxml.etree._BaseParser._parseDocFromFile File "src/lxml/parser.pxi", line 601, in lxml.etree._ParserContext._handleParseResultDoc File "src/lxml/parser.pxi", line 711, in lxml.etree._handleParseResult File "src/lxml/parser.pxi", line 638, in lxml.etree._raiseParseError OSError: Error reading file 'bibliography.xml': failed to load external entity "bibliography.xml" Build step 'Execute shell' marked build as failure $ ssh-agent -k unset SSH_AUTH_SOCK; unset SSH_AGENT_PID; echo Agent pid 19398 killed; [ssh-agent] Stopped. [BFA] Scanning build for known causes... [BFA] No failure causes found [BFA] Done. 0s Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds Notifying upstream projects of job completion Finished: FAILURE