Started by GitHub push by thvitt
Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/faust-macrogen
[ssh-agent] Looking for ssh-agent implementation...
[ssh-agent]   Exec ssh-agent (binary ssh-agent on a remote machine)
$ ssh-agent
SSH_AUTH_SOCK=/tmp/ssh-JVC8ItPABPQ2/agent.28285
SSH_AGENT_PID=28287
[ssh-agent] Started.
Running ssh-add (command line suppressed)
Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_6590904627840650264.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_6590904627840650264.key)
[ssh-agent] Using credentials git
Running ssh-add (command line suppressed)
Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_4500757424179999644.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_4500757424179999644.key)
[ssh-agent] Using credentials jenkins (wrzh075.rzhousing.uni-wuerzburg.de)
 > /usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10
Fetching upstream changes from git://github.com/faustedition/faust-macrogen
 > /usr/bin/git --version # timeout=10
using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de
 > /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/*
 > /usr/bin/git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > /usr/bin/git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision 87e9852bb6830cc337914845c2557b1f56d64fd6 (refs/remotes/origin/master)
 > /usr/bin/git config core.sparsecheckout # timeout=10
 > /usr/bin/git checkout -f 87e9852bb6830cc337914845c2557b1f56d64fd6
Commit message: "use the inverse edge weight for conflict path calculation"
 > /usr/bin/git rev-list --no-walk 50e899e8cb4d42ed26d3785354a09e1c44bb0f6f # timeout=10
 > /usr/bin/git remote # timeout=10
 > /usr/bin/git submodule init # timeout=10
 > /usr/bin/git submodule sync # timeout=10
 > /usr/bin/git config --get remote.origin.url # timeout=10
 > /usr/bin/git submodule init # timeout=10
 > /usr/bin/git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > /usr/bin/git config --get submodule.data.url # timeout=10
 > /usr/bin/git config -f .gitmodules --get submodule.data.path # timeout=10
 > /usr/bin/git submodule update --init --recursive --remote data
$ bash -c "[ -d \$HOME/.pyenv ]"
$ bash -c "cd /mnt/data/jenkins/workspace/faust-macrogen && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.7.2 \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true"
$ bash -c "mkdir \$HOME/.pyenv.lock"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.7.2 \$HOME/.pyenv/bin/pyenv versions --bare"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.7.2 \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.7.2 \$HOME/.pyenv/bin/pyenv exec pip list"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.7.2 \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "rm -rf \$HOME/.pyenv.lock"
[faust-macrogen] $ /bin/sh -xe /tmp/jenkins2268039755846396192.sh
+ pip install numpy
Requirement already satisfied: numpy in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (1.16.2)
You are using pip version 18.1, however version 19.0.3 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
+ pip install -e .
Obtaining file:///mnt/data/jenkins/workspace/faust-macrogen
Requirement already satisfied: numpy in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (1.16.2)
Requirement already satisfied: more-itertools in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (6.0.0)
Requirement already satisfied: networkx>=2.1 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (2.2)
Requirement already satisfied: python-igraph in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (0.7.1.post6)
Requirement already satisfied: pygraphviz in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (1.5)
Requirement already satisfied: ruamel.yaml in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (0.15.89)
Requirement already satisfied: pyyaml in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (3.13)
Requirement already satisfied: pandas in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (0.24.1)
Requirement already satisfied: openpyxl in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (2.6.1)
Requirement already satisfied: xlrd in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (1.2.0)
Requirement already satisfied: lxml in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (4.3.2)
Requirement already satisfied: requests in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (2.21.0)
Requirement already satisfied: requests-cache in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (0.4.13)
Requirement already satisfied: logging-tree in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (1.8)
Requirement already satisfied: colorlog in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (4.0.2)
Requirement already satisfied: tqdm in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (4.31.1)
Requirement already satisfied: dataclasses in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (0.6)
Requirement already satisfied: cvxpy in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (1.0.19)
Requirement already satisfied: cvxopt in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from faust-macrogen==0.9) (1.2.3)
Requirement already satisfied: decorator>=4.3.0 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from networkx>=2.1->faust-macrogen==0.9) (4.3.2)
Requirement already satisfied: pytz>=2011k in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from pandas->faust-macrogen==0.9) (2018.9)
Requirement already satisfied: python-dateutil>=2.5.0 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from pandas->faust-macrogen==0.9) (2.8.0)
Requirement already satisfied: jdcal in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from openpyxl->faust-macrogen==0.9) (1.4)
Requirement already satisfied: et_xmlfile in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from openpyxl->faust-macrogen==0.9) (1.0.1)
Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from requests->faust-macrogen==0.9) (3.0.4)
Requirement already satisfied: urllib3<1.25,>=1.21.1 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from requests->faust-macrogen==0.9) (1.24.1)
Requirement already satisfied: idna<2.9,>=2.5 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from requests->faust-macrogen==0.9) (2.8)
Requirement already satisfied: certifi>=2017.4.17 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from requests->faust-macrogen==0.9) (2018.11.29)
Requirement already satisfied: osqp in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (0.5.0)
Requirement already satisfied: ecos>=2 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (2.0.7.post1)
Requirement already satisfied: scs>=1.1.3 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (2.0.2)
Requirement already satisfied: multiprocess in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (0.70.7)
Requirement already satisfied: fastcache in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (1.0.2)
Requirement already satisfied: six in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (1.12.0)
Requirement already satisfied: scipy>=1.1.0 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from cvxpy->faust-macrogen==0.9) (1.2.1)
Requirement already satisfied: future in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from osqp->cvxpy->faust-macrogen==0.9) (0.17.1)
Requirement already satisfied: dill>=0.2.9 in /mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages (from multiprocess->cvxpy->faust-macrogen==0.9) (0.2.9)
Installing collected packages: faust-macrogen
  Found existing installation: faust-macrogen 0.9
    Uninstalling faust-macrogen-0.9:
      Successfully uninstalled faust-macrogen-0.9
  Running setup.py develop for faust-macrogen
Successfully installed faust-macrogen
You are using pip version 18.1, however version 19.0.3 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
+ macrogen
DEBUG:macrogen.config.preliminary:Loading default configuration.
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/bin/macrogen", line 11, in <module>
    load_entry_point('faust-macrogen', 'console_scripts', 'macrogen')()
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pkg_resources/__init__.py", line 487, in load_entry_point
    return get_distribution(dist).load_entry_point(group, name)
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pkg_resources/__init__.py", line 2728, in load_entry_point
    return ep.load()
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pkg_resources/__init__.py", line 2346, in load
    return self.resolve()
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pkg_resources/__init__.py", line 2352, in resolve
    module = __import__(self.module_name, fromlist=['__name__'], level=0)
  File "<frozen importlib._bootstrap>", line 983, in _find_and_load
  File "<frozen importlib._bootstrap>", line 953, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
  File "<frozen importlib._bootstrap>", line 983, in _find_and_load
  File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 677, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 728, in exec_module
  File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/__init__.py", line 1, in <module>
    from .graph import macrogenesis_graphs
  File "<frozen importlib._bootstrap>", line 983, in _find_and_load
  File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 677, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 728, in exec_module
  File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/graph.py", line 14, in <module>
    from .bibliography import BiblSource
  File "<frozen importlib._bootstrap>", line 983, in _find_and_load
  File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 677, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 728, in exec_module
  File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/bibliography.py", line 4, in <module>
    from .config import config, BibEntry
  File "<frozen importlib._bootstrap>", line 983, in _find_and_load
  File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 677, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 728, in exec_module
  File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/config.py", line 368, in <module>
    config = Configuration()
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/config.py", line 251, in __init__
    self.config_override = config_override
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/config.py", line 264, in config_override
    if hasattr(self, 'config'):
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/config.py", line 279, in __getattr__
    self._load_config()
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/config.py", line 289, in _load_config
    logger.debug("Loading default configuration.\n%s", "".join(traceback.format_stack()))

DEBUG:macrogen.config.preliminary:Reconfiguring logging
DEBUG:macrogen.config.preliminary:Loading logging from internal configuration ('macrogen', 'etc/logging.yaml')
WARNING  macrogen.config Configuration has already been loaded. Some override values may not have any effect.
WARNING  macrogen.config Configuration has already been loaded. Some override values may not have any effect.
WARNING  macrogen.uris Corrected faust://document/wa/2_V_H.33I to faust://document/landeck/2_V_H.33I, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_V_H.33I to faust://document/landeck/2_V_H.33I, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_V_H.33I to faust://document/landeck/2_V_H.33I, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/P129Var to faust://document/fischer-lamberg/2_II_H.2d, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.7/2 to faust://document/fischer_lamberg/2_III_H.7__2-3, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.7/3 to faust://document/fischer_lamberg/2_III_H.7__2-3, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/C.1_41 to faust://bibliography/C.1_41, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_I_H.alpha (2 H I)
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_I_H.alpha (2 H I)
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_I_H.alpha (2 H I)
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.alpha (2 H II)
WARNING  macrogen.uris Corrected faust://document/wa/Q to faust://bibliography/Q, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.alpha (2 H II)
WARNING  macrogen.uris Corrected faust://document/wa/C.1_41 to faust://bibliography/C.1_41, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/Q to faust://bibliography/Q, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.alpha (2 H II)
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.alpha (2 H II)
WARNING  macrogen.uris Corrected faust://document/wa/C.1_41 to faust://bibliography/C.1_41, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/C.1_41 to faust://bibliography/C.1_41, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/C.1_41 to faust://bibliography/C.1_41, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/Q to faust://bibliography/Q, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_V_H.alpha (2 H V)
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Corrected faust://document/wa/Q to faust://bibliography/Q, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.IIIalpha (2 III H.3a: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.IIIalpha (2 III H.3a: … (2))
WARNING  macrogen.uris Corrected faust://document/wa/C.1_41 to faust://bibliography/C.1_41, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.31_alpha (wa_faust: 2_II_H.31_)
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_2 to faust://document/fischer_lamberg/2_III_H.22_2, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_2 to faust://document/fischer_lamberg/2_III_H.22_2, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_3 to faust://document/fischer_lamberg/2_III_H.22_3, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_3 to faust://document/fischer_lamberg/2_III_H.22_3, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_4 to faust://document/fischer_lamberg/2_III_H.22_4, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_4 to faust://document/fischer_lamberg/2_III_H.22_4, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_4 to faust://document/fischer_lamberg/2_III_H.22_4, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_4 to faust://document/fischer_lamberg/2_III_H.22_4, but it is not in the database
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2_alpha (wa_faust: 2_III_H.2_)
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_5 to faust://document/fischer_lamberg/2_III_H.22_5, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_5 to faust://document/fischer_lamberg/2_III_H.22_5, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_5 to faust://document/fischer_lamberg/2_III_H.22_5, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_5 to faust://document/fischer_lamberg/2_III_H.22_5, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_5 to faust://document/fischer_lamberg/2_III_H.22_5, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_1 to faust://document/fischer_lamberg/2_III_H.22_1, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_2 to faust://document/fischer_lamberg/2_III_H.22_2, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_3 to faust://document/fischer_lamberg/2_III_H.22_3, but it is not in the database
WARNING  macrogen.uris Corrected faust://document/wa/2_III_H.22_4 to faust://document/fischer_lamberg/2_III_H.22_4, but it is not in the database
INFO     macrogen.graph Copying datings from inscriptions to witnesses
INFO     macrogen.graph Adopted H P22 from inscription H P22 i_2_u
INFO     macrogen.graph Adopted H P22 from inscription H P22 i_1_o
INFO     macrogen.graph Adopted H P167 from inscription H P167 i_r_u
INFO     macrogen.graph Adopted H P167 from inscription H P167 i_v
INFO     macrogen.graph Adopted H P167 from inscription H P167 i_uebrige
INFO     macrogen.graph Adopted H P176 Var from inscription H P176 Var i_r
INFO     macrogen.graph Adopted H P22 from inscription H P22 i_2_o
INFO     macrogen.graph Adopted H P22 from inscription H P22 i_uebrige
INFO     macrogen.graph Adopted 2 IV H.19 from inscription 2 IV H.19 i_uebrige
INFO     macrogen.graph Removing edges to ignore
INFO     macrogen.graph Extracted 4 subgraphs with conflicts
INFO     macrogen.graph Calculating minimum feedback arc set for 4 subgraphs
INFO     macrogen.fes.FES_Baharev configured solver: GLPK_MI, options: {'verbose': False, 'solver': 'GLPK_MI'} (installed solvers: ECOS, ECOS_BB, CVXOPT, GLPK, GLPK_MI, SCS, OSQP)
INFO     macrogen.fes.FES_Baharev Calculating FES for graph with 2 edges, max 1 feedback edges
INFO     macrogen.fes.FES_Baharev Baharev iteration 1, 0 <= objective <= 25, 1 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev upper == lower bound == 25, optimal solution found
INFO     macrogen.fes.FES_Baharev configured solver: GLPK_MI, options: {'verbose': False, 'solver': 'GLPK_MI'} (installed solvers: ECOS, ECOS_BB, CVXOPT, GLPK, GLPK_MI, SCS, OSQP)
INFO     macrogen.fes.FES_Baharev Calculating FES for graph with 10 edges, max 2 feedback edges
INFO     macrogen.fes.FES_Baharev Baharev iteration 1, 0 <= objective <= 3, 2 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Graph is acyclic, optimal solution found
INFO     macrogen.fes.FES_Baharev configured solver: GLPK_MI, options: {'verbose': False, 'solver': 'GLPK_MI'} (installed solvers: ECOS, ECOS_BB, CVXOPT, GLPK, GLPK_MI, SCS, OSQP)
INFO     macrogen.fes.FES_Baharev Calculating FES for graph with 130 edges, max 42 feedback edges
INFO     macrogen.fes.FES_Baharev Baharev iteration 1, 0 <= objective <= 7505, 42 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 2, 7 <= objective <= 7505, 82 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 3, 25 <= objective <= 7274, 118 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Graph is acyclic, optimal solution found
INFO     macrogen.fes.FES_Baharev configured solver: GLPK_MI, options: {'verbose': False, 'solver': 'GLPK_MI'} (installed solvers: ECOS, ECOS_BB, CVXOPT, GLPK, GLPK_MI, SCS, OSQP)
INFO     macrogen.fes.FES_Baharev Calculating FES for graph with 2278 edges, max 618 feedback edges
INFO     macrogen.fes.FES_Baharev Baharev iteration 1, 0 <= objective <= 67085, 618 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 2, 4147 <= objective <= 58140, 1090 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 3, 4678 <= objective <= 55510, 1529 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 4, 4892 <= objective <= 55510, 1778 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 5, 4901 <= objective <= 55510, 2019 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 6, 5055 <= objective <= 55510, 2267 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 7, 5089 <= objective <= 55510, 2451 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 8, 5118 <= objective <= 55510, 2630 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 9, 5386 <= objective <= 55510, 2795 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 10, 5415 <= objective <= 55510, 3038 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 11, 5443 <= objective <= 55510, 3273 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 12, 5451 <= objective <= 55510, 3606 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 13, 5481 <= objective <= 55510, 3776 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 14, 5484 <= objective <= 55510, 3982 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 15, 5507 <= objective <= 55510, 4142 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 16, 5511 <= objective <= 55510, 4297 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 17, 5565 <= objective <= 55510, 4453 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 18, 5636 <= objective <= 55510, 4600 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 19, 5656 <= objective <= 55510, 4754 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 20, 5660 <= objective <= 55510, 4905 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 21, 5798 <= objective <= 55510, 5144 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 22, 5801 <= objective <= 55510, 5384 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 23, 5804 <= objective <= 55510, 5622 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 24, 5832 <= objective <= 55510, 5862 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 25, 5836 <= objective <= 55510, 6014 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 26, 5901 <= objective <= 55510, 6253 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 27, 5936 <= objective <= 55510, 6489 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 28, 5939 <= objective <= 55510, 6724 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 29, 5939 <= objective <= 55510, 6762 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 30, 5942 <= objective <= 55510, 6799 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 31, 5946 <= objective <= 55510, 6924 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 32, 5948 <= objective <= 55510, 6959 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 33, 5949 <= objective <= 55510, 6995 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 34, 5951 <= objective <= 55510, 7028 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 35, 5951 <= objective <= 55510, 7151 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 36, 5951 <= objective <= 55510, 7273 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 37, 5952 <= objective <= 55510, 7307 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 38, 5953 <= objective <= 55510, 7340 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 39, 5954 <= objective <= 55510, 7372 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 40, 5954 <= objective <= 55510, 7406 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 41, 5955 <= objective <= 55510, 7438 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 42, 5955 <= objective <= 55510, 7558 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 43, 5958 <= objective <= 55510, 7589 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Baharev iteration 44, 5959 <= objective <= 55510, 7821 simple cycles
Long-step dual simplex will be used
INFO     macrogen.fes.FES_Baharev Graph is acyclic, optimal solution found
WARNING  macrogen.graph Found 11 self loops, will also remove those. Affected nodes: 2 II H.22, 2 III H.2:1, 2 III H.6:2, 2 III H.6:2, 2 III H.70, 2 III H.50c, 2 III H.76, fischer_lamberg: 2_III_H.15 , 2 III H.2:2, 2 III H.3a:1, 2 III H.3a:2
INFO     macrogen.graph Building DAG from remaining data
INFO     macrogen.graph Double-checking removed edges ...
INFO     macrogen.graph Marking 173 conflicting edges for deletion
INFO     macrogen.graph Removed 173 of the original 3304 edges
INFO     macrogen.graph Augmenting refs with data from graphs
INFO     macrogen.graph Creating sort order from DAG
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))
WARNING  macrogen.uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2alpha (2 III H.2: … (2))

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Rendering:  95%|█████████▌| 993/1044 [00:21<00:12,  4.17 SVGs/s]/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: Error: trouble in init_rank
	%0 1
	%0 4
	%0 1
	%0 1
	%0 2
	%0 2
	%0 1
	%0 2
	1830-12-18 1
	%0 2
	1830-12-01 1
	%0 1
	%0 1
	faust://document/faustedition/2_V_H.32a 7
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
WARNING  macrogen.visualize Rendering target/macrogenesis/scene_2-3-3-graph.dot with 149 nodes and 420 edges took 0:00:15.074003

Rendering:  95%|█████████▌| 995/1044 [00:22<00:18,  2.67 SVGs/s]
Rendering:  95%|█████████▌| 997/1044 [00:25<00:28,  1.63 SVGs/s]
Rendering:  96%|█████████▌| 998/1044 [00:25<00:21,  2.16 SVGs/s]
Rendering:  96%|█████████▌| 999/1044 [00:25<00:16,  2.80 SVGs/s]
Rendering:  96%|█████████▌| 1000/1044 [00:25<00:12,  3.43 SVGs/s]/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: Error: trouble in init_rank
	%0 1
	%0 4
	%0 1
	%0 1
	%0 2
	%0 2
	%0 1
	%0 2
	1830-12-18 1
	%0 2
	1830-12-01 1
	%0 1
	%0 1
	faust://document/faustedition/2_V_H.32a 7
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1
	%0 1

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
WARNING  macrogen.visualize Rendering target/macrogenesis/scene_2-3-2-graph.dot with 159 nodes and 451 edges took 0:00:22.943709

Rendering:  96%|█████████▌| 1001/1044 [00:30<01:12,  1.68s/ SVGs]
Rendering:  96%|█████████▌| 1002/1044 [00:30<00:50,  1.21s/ SVGs]
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Rendering:  97%|█████████▋| 1009/1044 [00:31<00:07,  4.87 SVGs/s]
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Rendering:  97%|█████████▋| 1011/1044 [00:31<00:05,  6.08 SVGs/s]
Rendering:  97%|█████████▋| 1012/1044 [00:31<00:04,  6.56 SVGs/s]
Rendering:  97%|█████████▋| 1014/1044 [00:31<00:04,  7.48 SVGs/s]
Rendering:  97%|█████████▋| 1015/1044 [00:31<00:03,  7.86 SVGs/s]
Rendering:  97%|█████████▋| 1017/1044 [00:32<00:03,  8.45 SVGs/s]
Rendering:  98%|█████████▊| 1019/1044 [00:32<00:02,  9.10 SVGs/s]/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: Warning: Unable to reclaim box space in spline routing for edge "faust://document/faustedition/2_III_H.34" -> "faust://document/faustedition/2_III_H.30". Something is probably seriously wrong.

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
WARNING  macrogen.visualize Rendering target/macrogenesis/scene_2-3-1-graph.dot with 178 nodes and 573 edges took 0:00:25.013017

Rendering:  98%|█████████▊| 1021/1044 [00:32<00:02, 10.81 SVGs/s]
Rendering:  98%|█████████▊| 1023/1044 [00:32<00:01, 12.26 SVGs/s]
Rendering:  98%|█████████▊| 1026/1044 [00:32<00:01, 14.14 SVGs/s]/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: libpath/shortest.c:324: triangulation failed
libpath/shortest.c:207: cannot find triangle path

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
WARNING  macrogen.visualize Rendering target/macrogenesis/hertz1932-graph.dot with 86 nodes and 421 edges took 0:00:11.299458

Rendering:  99%|█████████▊| 1029/1044 [00:32<00:00, 16.70 SVGs/s]
Rendering:  99%|█████████▉| 1032/1044 [00:33<00:00, 12.35 SVGs/s]
Rendering:  99%|█████████▉| 1034/1044 [00:33<00:00, 11.01 SVGs/s]/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: Warning: Unable to reclaim box space in spline routing for edge "faust://document/faustedition/2_V_H.26a" -> "1825-04-27". Something is probably seriously wrong.

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
WARNING  macrogen.visualize Rendering target/macrogenesis/self-graph.dot with 250 nodes and 538 edges took 0:00:05.992515
/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: libpath/shortest.c:324: triangulation failed
libpath/shortest.c:207: cannot find triangle path

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
WARNING  macrogen.visualize Rendering target/macrogenesis/landeck1981-graph.dot with 118 nodes and 511 edges took 0:00:14.845951

Rendering:  99%|█████████▉| 1036/1044 [00:40<00:08,  1.10s/ SVGs]WARNING  macrogen.visualize Rendering target/macrogenesis/heuristic-graph.dot with 300 nodes and 608 edges took 0:00:10.791433

Rendering:  99%|█████████▉| 1036/1044 [00:59<00:08,  1.10s/ SVGs]WARNING  macrogen.visualize Rendering target/macrogenesis/wa_I_15_2-graph.dot with 332 nodes and 1116 edges took 0:00:53.919075

Rendering:  99%|█████████▉| 1038/1044 [01:26<00:46,  7.72s/ SVGs]Warning: graph has 1181 nodes...layout may take a long time.
WARNING  macrogen.visualize Rendering target/macrogenesis/tred-graph.dot with 1181 nodes and 1605 edges took 0:01:34.129863

Rendering: 100%|█████████▉| 1039/1044 [02:14<01:38, 19.76s/ SVGs]WARNING  macrogen.visualize Rendering target/macrogenesis/fischer-lamberg1955-graph.dot with 339 nodes and 1242 edges took 0:02:01.974948

Rendering: 100%|█████████▉| 1040/1044 [02:20<01:02, 15.71s/ SVGs]ERROR    macrogen.visualize Failed to render target/macrogenesis/bohnenkamp1994-graph.dot
Traceback (most recent call last):
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/visualize.py", line 182, in render_file
    graph.draw(resultfn, format='svg', prog='dot')
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py", line 1515, in draw
    data = self._run_prog(prog, args)
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py", line 1364, in _run_prog
    raise IOError(b"".join(errors).decode(self.encoding))
OSError: Warning: Unable to reclaim box space in spline routing for edge "faust://inscription/faustedition/2_III_H.8/i_r" -> "faust://document/faustedition/2_III_H.8". Something is probably seriously wrong.
Warning: Unable to reclaim box space in spline routing for edge "faust://document/faustedition/2_III_H.34" -> "faust://document/faustedition/2_III_H.30". Something is probably seriously wrong.
*** Error in `/usr/bin/dot': double free or corruption (!prev): 0x0000565541ea3fe0 ***
======= Backtrace: =========
/lib/x86_64-linux-gnu/libc.so.6(+0x70bfb)[0x7fa2e108fbfb]
/lib/x86_64-linux-gnu/libc.so.6(+0x76fc6)[0x7fa2e1095fc6]
/lib/x86_64-linux-gnu/libc.so.6(+0x7780e)[0x7fa2e109680e]
/usr/lib/libgvc.so.6(+0x4609d)[0x7fa2e161a09d]
/usr/lib/graphviz/libgvplugin_dot_layout.so.6(+0x1d057)[0x7fa2db89d057]
/usr/lib/graphviz/libgvplugin_dot_layout.so.6(+0x1a7a4)[0x7fa2db89a7a4]
/usr/lib/graphviz/libgvplugin_dot_layout.so.6(+0xbe5d)[0x7fa2db88be5d]
/usr/lib/graphviz/libgvplugin_dot_layout.so.6(dot_layout+0x338)[0x7fa2db88c4c8]
/usr/lib/libgvc.so.6(gvLayoutJobs+0xd2)[0x7fa2e15f6d22]
/usr/bin/dot(+0x1050)[0x56553f7e6050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf1)[0x7fa2e103f2e1]
/usr/bin/dot(+0x10ea)[0x56553f7e60ea]
======= Memory map: ========
56553f7e5000-56553f7e7000 r-xp 00000000 08:02 17581702                   /usr/bin/dot
56553f9e6000-56553f9e7000 r--p 00001000 08:02 17581702                   /usr/bin/dot
56553f9e7000-56553f9e8000 rw-p 00002000 08:02 17581702                   /usr/bin/dot
565540630000-565541ec4000 rw-p 00000000 00:00 0                          [heap]
7fa2d4000000-7fa2d4021000 rw-p 00000000 00:00 0 
7fa2d4021000-7fa2d8000000 ---p 00000000 00:00 0 
7fa2db5ef000-7fa2db605000 r-xp 00000000 08:02 786562                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7fa2db605000-7fa2db804000 ---p 00016000 08:02 786562                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7fa2db804000-7fa2db805000 r--p 00015000 08:02 786562                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7fa2db805000-7fa2db806000 rw-p 00016000 08:02 786562                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7fa2db806000-7fa2db880000 rw-p 00000000 00:00 0 
7fa2db880000-7fa2db8a4000 r-xp 00000000 08:02 17698999                   /usr/lib/graphviz/libgvplugin_dot_layout.so.6.0.0
7fa2db8a4000-7fa2dbaa3000 ---p 00024000 08:02 17698999                   /usr/lib/graphviz/libgvplugin_dot_layout.so.6.0.0
7fa2dbaa3000-7fa2dbaa4000 r--p 00023000 08:02 17698999                   /usr/lib/graphviz/libgvplugin_dot_layout.so.6.0.0
7fa2dbaa4000-7fa2dbaa5000 rw-p 00024000 08:02 17698999                   /usr/lib/graphviz/libgvplugin_dot_layout.so.6.0.0
7fa2dbaa5000-7fa2dbaad000 rw-p 00000000 00:00 0 
7fa2dbaad000-7fa2dbac7000 r-xp 00000000 08:02 17698998                   /usr/lib/graphviz/libgvplugin_core.so.6.0.0
7fa2dbac7000-7fa2dbcc6000 ---p 0001a000 08:02 17698998                   /usr/lib/graphviz/libgvplugin_core.so.6.0.0
7fa2dbcc6000-7fa2dbcc7000 r--p 00019000 08:02 17698998                   /usr/lib/graphviz/libgvplugin_core.so.6.0.0
7fa2dbcc7000-7fa2dbccb000 rw-p 0001a000 08:02 17698998                   /usr/lib/graphviz/libgvplugin_core.so.6.0.0
7fa2dbccb000-7fa2dbcde000 r-xp 00000000 08:02 786954                     /lib/x86_64-linux-gnu/libbsd.so.0.8.3
7fa2dbcde000-7fa2dbede000 ---p 00013000 08:02 786954                     /lib/x86_64-linux-gnu/libbsd.so.0.8.3
7fa2dbede000-7fa2dbedf000 r--p 00013000 08:02 786954                     /lib/x86_64-linux-gnu/libbsd.so.0.8.3
7fa2dbedf000-7fa2dbee0000 rw-p 00014000 08:02 786954                     /lib/x86_64-linux-gnu/libbsd.so.0.8.3
7fa2dbee0000-7fa2dbee1000 rw-p 00000000 00:00 0 
7fa2dbee1000-7fa2dbee8000 r-xp 00000000 08:02 17579387                   /usr/lib/x86_64-linux-gnu/libdatrie.so.1.3.3
7fa2dbee8000-7fa2dc0e7000 ---p 00007000 08:02 17579387                   /usr/lib/x86_64-linux-gnu/libdatrie.so.1.3.3
7fa2dc0e7000-7fa2dc0e8000 r--p 00006000 08:02 17579387                   /usr/lib/x86_64-linux-gnu/libdatrie.so.1.3.3
7fa2dc0e8000-7fa2dc0e9000 rw-p 00007000 08:02 17579387                   /usr/lib/x86_64-linux-gnu/libdatrie.so.1.3.3
7fa2dc0e9000-7fa2dc114000 r-xp 00000000 08:02 17566194                   /usr/lib/x86_64-linux-gnu/libgraphite2.so.3.0.1
7fa2dc114000-7fa2dc313000 ---p 0002b000 08:02 17566194                   /usr/lib/x86_64-linux-gnu/libgraphite2.so.3.0.1
7fa2dc313000-7fa2dc315000 r--p 0002a000 08:02 17566194                   /usr/lib/x86_64-linux-gnu/libgraphite2.so.3.0.1
7fa2dc315000-7fa2dc316000 rw-p 0002c000 08:02 17566194                   /usr/lib/x86_64-linux-gnu/libgraphite2.so.3.0.1
7fa2dc316000-7fa2dc31b000 r-xp 00000000 08:02 17579184                   /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7fa2dc31b000-7fa2dc51a000 ---p 00005000 08:02 17579184                   /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7fa2dc51a000-7fa2dc51b000 r--p 00004000 08:02 17579184                   /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7fa2dc51b000-7fa2dc51c000 rw-p 00005000 08:02 17579184                   /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7fa2dc51c000-7fa2dc51f000 r-xp 00000000 08:02 17571169                   /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7fa2dc51f000-7fa2dc71e000 ---p 00003000 08:02 17571169                   /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7fa2dc71e000-7fa2dc71f000 r--p 00002000 08:02 17571169                   /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7fa2dc71f000-7fa2dc720000 rw-p 00003000 08:02 17571169                   /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7fa2dc720000-7fa2dc792000 r-xp 00000000 08:02 786686                     /lib/x86_64-linux-gnu/libpcre.so.3.13.3
7fa2dc792000-7fa2dc991000 ---p 00072000 08:02 786686                     /lib/x86_64-linux-gnu/libpcre.so.3.13.3
7fa2dc991000-7fa2dc992000 r--p 00071000 08:02 786686                     /lib/x86_64-linux-gnu/libpcre.so.3.13.3
7fa2dc992000-7fa2dc993000 rw-p 00072000 08:02 786686                     /lib/x86_64-linux-gnu/libpcre.so.3.13.3
7fa2dc993000-7fa2dc99a000 r-xp 00000000 08:02 17568459                   /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4
7fa2dc99a000-7fa2dcb9a000 ---p 00007000 08:02 17568459                   /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4
7fa2dcb9a000-7fa2dcb9b000 r--p 00007000 08:02 17568459                   /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4
7fa2dcb9b000-7fa2dcb9c000 rw-p 00008000 08:02 17568459                   /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4
7fa2dcb9c000-7fa2dcba4000 r-xp 00000000 08:02 17573534                   /usr/lib/x86_64-linux-gnu/libthai.so.0.3.0
7fa2dcba4000-7fa2dcda4000 ---p 00008000 08:02 17573534                   /usr/lib/x86_64-linux-gnu/libthai.so.0.3.0
7fa2dcda4000-7fa2dcda5000 r--p 00008000 08:02 17573534                   /usr/lib/x86_64-linux-gnu/libthai.so.0.3.0
7fa2dcda5000-7fa2dcda6000 rw-p 00009000 08:02 17573534                   /usr/lib/x86_64-linux-gnu/libthai.so.0.3.0
7fa2dcda6000-7fa2dce39000 r-xp 00000000 08:02 17576450                   /usr/lib/x86_64-linux-gnu/libharfbuzz.so.0.10400.2
7fa2dce39000-7fa2dd038000 ---p 00093000 08:02 17576450                   /usr/lib/x86_64-linux-gnu/libharfbuzz.so.0.10400.2
7fa2dd038000-7fa2dd03a000 r--p 00092000 08:02 17576450                   /usr/lib/x86_64-linux-gnu/libharfbuzz.so.0.10400.2
7fa2dd03a000-7fa2dd03b000 rw-p 00094000 08:02 17576450                   /usr/lib/x86_64-linux-gnu/libharfbuzz.so.0.10400.2
7fa2dd03b000-7fa2dd042000 r-xp 00000000 08:02 791334                     /lib/x86_64-linux-gnu/librt-2.24.so
7fa2dd042000-7fa2dd241000 ---p 00007000 08:02 791334                     /lib/x86_64-linux-gnu/librt-2.24.so
7fa2dd241000-7fa2dd242000 r--p 00006000 08:02 791334                     /lib/x86_64-linux-gnu/librt-2.24.so
7fa2dd242000-7fa2dd243000 rw-p 00007000 08:02 791334                     /lib/x86_64-linux-gnu/librt-2.24.so
7fa2dd243000-7fa2dd254000 r-xp 00000000 08:02 17569143                   /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7fa2dd254000-7fa2dd453000 ---p 00011000 08:02 17569143                   /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7fa2dd453000-7fa2dd454000 r--p 00010000 08:02 17569143                   /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7fa2dd454000-7fa2dd455000 rw-p 00011000 08:02 17569143                   /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7fa2dd455000-7fa2dd58f000 r-xp 00000000 08:02 17564312                   /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7fa2dd58f000-7fa2dd78f000 ---p 0013a000 08:02 17564312                   /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7fa2dd78f000-7fa2dd790000 r--p 0013a000 08:02 17564312                   /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7fa2dd790000-7fa2dd795000 rw-p 0013b000 08:02 17564312                   /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7fa2dd795000-7fa2dd79e000 r-xp 00000000 08:02 17571186                   /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7fa2dd79e000-7fa2dd99d000 ---p 00009000 08:02 17571186                   /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7fa2dd99d000-7fa2dd99e000 r--p 00008000 08:02 17571186                   /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7fa2dd99e000-7fa2dd99f000 rw-p 00009000 08:02 17571186                   /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7fa2dd99f000-7fa2dd9ab000 r-xp 00000000 08:02 17571180                   /usr/lib/x86_64-linux-gnu/libxcb-render.so.0.0.0
7fa2dd9ab000-7fa2ddbab000 ---p 0000c000 08:02 17571180                   /usr/lib/x86_64-linux-gnu/libxcb-render.so.0.0.0
7fa2ddbab000-7fa2ddbac000 r--p 0000c000 08:02 17571180                   /usr/lib/x86_64-linux-gnu/libxcb-render.so.0.0.0
7fa2ddbac000-7fa2ddbad000 rw-p 0000d000 08:02 17571180                   /usr/lib/x86_64-linux-gnu/libxcb-render.so.0.0.0
7fa2ddbad000-7fa2ddbd4000 r-xp 00000000 08:02 17571173                   /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7fa2ddbd4000-7fa2dddd3000 ---p 00027000 08:02 17571173                   /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7fa2dddd3000-7fa2dddd4000 r--p 00026000 08:02 17571173                   /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7fa2dddd4000-7fa2dddd5000 rw-p 00027000 08:02 17571173                   /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7fa2dddd5000-7fa2dddd7000 r-xp 00000000 08:02 17571182                   /usr/lib/x86_64-linux-gnu/libxcb-shm.so.0.0.0
7fa2dddd7000-7fa2ddfd7000 ---p 00002000 08:02 17571182                   /usr/lib/x86_64-linux-gnu/libxcb-shm.so.0.0.0
7fa2ddfd7000-7fa2ddfd8000 r--p 00002000 08:02 17571182                   /usr/lib/x86_64-linux-gnu/libxcb-shm.so.0.0.0
7fa2ddfd8000-7fa2ddfd9000 rw-p 00003000 08:02 17571182                   /usr/lib/x86_64-linux-gnu/libxcb-shm.so.0.0.0
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7fa2e19d7000-7fa2e19d8000 r--s 00000000 08:02 22422246                   /var/cache/fontconfig/30829fa25452a46451e813d634d7f916-le64.cache-4
7fa2e19d8000-7fa2e19e5000 r--s 00000000 08:02 22416083                   /var/cache/fontconfig/198d8fcf01c96d0cf813f74fd759bdb7-le64.cache-4
7fa2e19e5000-7fa2e19e8000 r--s 00000000 08:02 22415904                   /var/cache/fontconfig/75114ca45c98e8a441da0ff356701271-le64.cache-4
7fa2e19e8000-7fa2e19f3000 r--s 00000000 08:02 22415851                   /var/cache/fontconfig/83bf95040141907cd45bb53cf7c1c148-le64.cache-4
7fa2e19f3000-7fa2e19fc000 r--s 00000000 08:02 22416746                   /var/cache/fontconfig/d0972c3d32f097851eb916381fc38920-le64.cache-4
7fa2e19fc000-7fa2e19fe000 r--s 00000000 08:02 22415819                   /var/cache/fontconfig/6e6b34ae150a7ad95e82fb4a522f0bda-le64.cache-4
7fa2e19fe000-7fa2e19ff000 r--s 00000000 08:02 22415734                   /var/cache/fontconfig/3334a778d104e76d188e9df399bc24d2-le64.cache-4
7fa2e19ff000-7fa2e1a06000 r--s 00000000 08:02 22415191                   /var/cache/fontconfig/53d14c92082a93e67d5078324eb314ca-le64.cache-4
7fa2e1a06000-7fa2e1a0a000 r--s 00000000 08:02 22415138                   /var/cache/fontconfig/6c08beecf0dac481ec92e759e0c2e6d7-le64.cache-4
7fa2e1a0a000-7fa2e1a0e000 r--s 00000000 08:02 22414918                   /var/cache/fontconfig/4d6aee6d44eccb37054d3216e945f618-le64.cache-4
7fa2e1a0e000-7fa2e1a12000 r--s 00000000 08:02 22414915                   /var/cache/fontconfig/d6c6df98c3df5faf9bd0f8ef4d91efe5-le64.cache-4
7fa2e1a12000-7fa2e1a16000 r--s 00000000 08:02 22414804                   /var/cache/fontconfig/9fb319ef52839f11ee26ab8b4cffa12b-le64.cache-4
7fa2e1a16000-7fa2e1a18000 r--s 00000000 08:02 22414786                   /var/cache/fontconfig/43bfe21a9e1edebcf703d79ee2950b06-le64.cache-4
7fa2e1a18000-7fa2e1a2b000 r--s 00000000 08:02 22414768                   /var/cache/fontconfig/4ac51e5cfbc76fc3f983e470323a16d3-le64.cache-4
7fa2e1a2b000-7fa2e1a2e000 r--s 00000000 08:02 22414670                   /var/cache/fontconfig/c19b55eb3b4c5b40ea175e31682068a5-le64.cache-4
7fa2e1a2e000-7fa2e1a2f000 r--s 00000000 08:02 22414635                   /var/cache/fontconfig/c277e94e32b20404286a1ddafa5a80f0-le64.cache-4
7fa2e1a2f000-7fa2e1a35000 r--s 00000000 08:02 22414586                   /var/cache/fontconfig/3629f2adf904f9a612908891fae71ceb-le64.cache-4
7fa2e1a35000-7fa2e1a4b000 r--s 00000000 08:02 22413555                   /var/cache/fontconfig/e13b20fdb08344e0e664864cc2ede53d-le64.cache-4
7fa2e1a4b000-7fa2e1a69000 r--s 00000000 08:02 22416496                   /var/cache/fontconfig/467c019e582ee353435ea5c21d137ef6-le64.cache-4
7fa2e1a69000-7fa2e1a6f000 rw-p 00000000 00:00 0 
7fa2e1a6f000-7fa2e1a71000 r--s 00000000 08:02 22414585                   /var/cache/fontconfig/62f91419b9ebdb6975e7e41ab6412357-le64.cache-4
7fa2e1a71000-7fa2e1a74000 r--s 00000000 08:02 22414506                   /var/cache/fontconfig/de83a0a961185c8bd1f159015d56c039-le64.cache-4
7fa2e1a74000-7fa2e1a78000 r--s 00000000 08:02 22422251                   /var/cache/fontconfig/7ef2298fde41cc6eeb7af42e48b7d293-le64.cache-4
7fa2e1a78000-7fa2e1a79000 r--s 00000000 08:02 22414482                   /var/cache/fontconfig/573ec803664ed168555e0e8b6d0f0c7f-le64.cache-4
7fa2e1a79000-7fa2e1a7c000 r--s 00000000 08:02 22417410                   /var/cache/fontconfig/16326683038b281783a0ef8c680e3a10-le64.cache-4
7fa2e1a7c000-7fa2e1a89000 r--s 00000000 08:02 22417401                   /var/cache/fontconfig/8f02d4cb045bd6ce15663e43f347c9f8-le64.cache-4
7fa2e1a89000-7fa2e1a8a000 r--s 00000000 08:02 22417392                   /var/cache/fontconfig/e0aa53bcfa504e64f87823c16bc01eb6-le64.cache-4
7fa2e1a8a000-7fa2e1a92000 r--s 00000000 fe:00 62652426                   /mnt/data/jenkins/.cache/fontconfig/44f28d761bb352833f3f0b5b1020972b-le64.cache-4
7fa2e1a92000-7fa2e1a95000 rw-p 00000000 00:00 0 
7fa2e1a95000-7fa2e1a96000 r--p 00023000 08:02 786472                     /lib/x86_64-linux-gnu/ld-2.24.so
7fa2e1a96000-7fa2e1a97000 rw-p 00024000 08:02 786472                     /lib/x86_64-linux-gnu/ld-2.24.so
7fa2e1a97000-7fa2e1a98000 rw-p 00000000 00:00 0 
7ffe58163000-7ffe5818b000 rw-p 00000000 00:00 0                          [stack]
7ffe5819d000-7ffe5819f000 r--p 00000000 00:00 0                          [vvar]
7ffe5819f000-7ffe581a1000 r-xp 00000000 00:00 0                          [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]

WARNING  macrogen.visualize Rendering target/macrogenesis/bohnenkamp1994-graph.dot with 470 nodes and 1416 edges took 0:02:07.030622

Rendering: 100%|█████████▉| 1041/1044 [02:25<00:37, 12.42s/ SVGs]/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py:1367: RuntimeWarning: libpath/shortest.c:324: triangulation failed
libpath/shortest.c:207: cannot find triangle path
libpath/shortest.c:324: triangulation failed
libpath/shortest.c:207: cannot find triangle path

  warnings.warn(b"".join(errors).decode(self.encoding), RuntimeWarning)
ERROR    macrogen.visualize Failed to render target/macrogenesis/scc-04-graph.dot
Traceback (most recent call last):
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/visualize.py", line 182, in render_file
    graph.draw(resultfn, format='svg', prog='dot')
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py", line 1515, in draw
    data = self._run_prog(prog, args)
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py", line 1364, in _run_prog
    raise IOError(b"".join(errors).decode(self.encoding))
OSError
WARNING  macrogen.visualize Rendering target/macrogenesis/scc-04-graph.dot with 927 nodes and 2722 edges took 0:32:04.354815

Rendering: 100%|█████████▉| 1042/1044 [32:14<18:10, 545.28s/ SVGs]Warning: graph has 1239 nodes...layout may take a long time.
WARNING  macrogen.visualize Rendering target/macrogenesis/dag-graph.dot with 1239 nodes and 3131 edges took 0:54:18.267618

Rendering: 100%|█████████▉| 1043/1044 [54:57<13:10, 790.80s/ SVGs]Warning: graph has 1179 nodes...layout may take a long time.
ERROR    macrogen.visualize Failed to render target/macrogenesis/wcc-01-graph.dot
Traceback (most recent call last):
  File "/mnt/data/jenkins/workspace/faust-macrogen/src/macrogen/visualize.py", line 182, in render_file
    graph.draw(resultfn, format='svg', prog='dot')
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py", line 1515, in draw
    data = self._run_prog(prog, args)
  File "/mnt/data/jenkins/.pyenv/versions/3.7.2/lib/python3.7/site-packages/pygraphviz/agraph.py", line 1364, in _run_prog
    raise IOError(b"".join(errors).decode(self.encoding))
OSError
WARNING  macrogen.visualize Rendering target/macrogenesis/wcc-01-graph.dot with 1179 nodes and 3303 edges took 0:55:18.416929

Rendering: 100%|██████████| 1044/1044 [55:28<00:00, 562.78s/ SVGs]
+ cd target
+ rsync -a -u --chmod=ug+rwX,o+rX,Dg+s --omit-dir-times --info=del,stats2,copy,flist2 macrogenesis beta.faustedition.net:/var/www/dev/
sending incremental file list

Number of files: 7,272 (reg: 7,268, dir: 4)
Number of created files: 3 (reg: 3)
Number of deleted files: 0
Number of regular files transferred: 3,201
Total file size: 278,589,109 bytes
Total transferred file size: 67,993,334 bytes
Literal data: 57,105,310 bytes
Matched data: 10,888,024 bytes
File list size: 262,105
File list generation time: 0.001 seconds
File list transfer time: 0.000 seconds
Total bytes sent: 57,585,663
Total bytes received: 553,743

sent 57,585,663 bytes  received 553,743 bytes  7,751,920.80 bytes/sec
total size is 278,589,109  speedup is 4.79
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 28287 killed;
[ssh-agent] Stopped.
Archiving artifacts
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
Finished: SUCCESS