Changes

Basic implementation of a split model.

When configured using model='split', each reference (witness,
inscription etc.) is not represented by one graph node but rather by
two: one for the start of the writing process, one for the end of it.

This commit introduces the basic model, further work is required to
adjust the rest of the program to that.
 (commit: 677774f)

split support in building the graph
 (commit: 6ce72c8)

split support in uris
 (commit: 3657bcf)

split support for ref tables and main ref report
 (commit: 3ceeb7e)

split support for the 'missing' report
 (commit: 2d7bc3e)

adjusted visualizations for start-end model
 (commit: 6450aaf)

support model=split in graphs.node()/graphs.nodes() → scene graphs
 (commit: cde58f6)

model option: inscriptions happen during their parent witness's timespan
 (commit: e9232f9)

Improved label for bibliography nodes
 (commit: cb6bf28)

Improved labels in split mode
 (commit: 848d2a9)

Fixed order report for split view
 (commit: d290d02)

Report configuration
 (commit: cdd28ed)

Fix: Allow to unpickle SplitReference

unpickling may call __getattr__ before the __dict__ is restored.
 (commit: 06dc4c7)

Basic split-reverse implementation
 (commit: 48b20b5)

use subgraph in node pages (instead of separate implementation)
 (commit: 86f3b90)

Implemented witness details in a table instead of in the witnesses
 (commit: 6cdc24b)

Rank correlation with baseline ordering ignoring graph topology
 (commit: 7adb472)

Included baseline order in the refs table
 (commit: 1370760)

include nodes w/o macrogenesis data into details table etc.
 (commit: 72d665d)

fixed report for refs not in macrogenesis data
 (commit: ee6c778)

Fix: Missing witnesses got lost during load/save cycle
 (commit: 0489e1c)

optional models for temp-syn
 (commit: 3f01562)

report on temp-syn clusters
 (commit: 9d0c163)

temp-syn in config
 (commit: de21930)

export stats as CSV, as well
 (commit: 2d9ca3c)

option to modify individual bibscore values from the command line
 (commit: e220e4a)

corner case issues
 (commit: 7ef8a8c)

refactor stats page to use details table instead of redundant own statistic
 (commit: cd4e5bc)

inscription method copy-orphans
 (commit: d03486a)

scripts for comparison experiments
 (commit: 07f66d2)

moved experimental stuff to separate subdir
 (commit: 507b727)

some experimental data
 (commit: 7091bbf)

Basic D3 based graph viewer
 (commit: bed3ff4)

Simple script to diff the order from two macrogenesis graphs
 (commit: 32d9a75)

Added dates to diff script
 (commit: ba2a2c5)

Added rank info (i.e. nodes before)
 (commit: 4750444)

Summary table & improved visualizations
 (commit: 93dad2b)

Link to files from the conflicting subsets
 (commit: 1a412e1)

graphviewer: Allow to explicitely switch on/off temp-syn
 (commit: 534e3ca)

graphviewer: (hacked) support for multiple models
 (commit: dd72ed5)

calculate Spearman rank correlation for each diff pair
 (commit: 5debc13)

graphviewer: update URL and download links on form updates
 (commit: 4919ae9)

graphviewer: update URL and download links on form updates
 (commit: 192c8ab)

Optional topologically sorted graph.

When enabling this option (e.g., in the graphviewer), the references
are arranged according to the topological ordering from the model
(that is also used for ordering the witnesses in the edition).

Note that this works by introducing additional, invisible edges, so
you shouldn’t use the graph or dot file produced using this method for
anything else than visualization purposes.
 (commit: cd640db)

Allow to collapse parallel edges in graphs.
 (commit: f20b7e1)

fixup! Optional topologically sorted graph.
 (commit: c2b4c07)

fixup! fixup! Optional topologically sorted graph.
 (commit: 985abda)

fixup! Allow to collapse parallel edges in graphs.
 (commit: 4fee5ad)

Fix: Conflict edges would disappear from split model
 (commit: 148b415)

Fix: Avoid 'None' nodes
 (commit: 4c84f74)

Graphviewer: Make rankdir configurable
 (commit: 0b16fce)

Graphviewer: Major layout update
 (commit: 728c466)

graphviewer: Adjust form according to layout
 (commit: 240dbcb)

graphviewer: Fixed the download link updating
 (commit: 00a0b49)

graphviewer: interesting nodes suggestions
 (commit: f2293d6)

graphviewer: initialize form values on load

This is easier then going via template, at least as long we don’t switch to something like WTForms
 (commit: a565f1b)

graphviewer: Allow to configure which paths between central nodes are included
 (commit: 0df71e7)

graphviewer: inscription clusters
 (commit: 05bb205)

actually use path_to
 (commit: 4885b30)

fix: None node might appear in topological order with only one reference ...
 (commit: f82910f)

Graphviewer: Form rearrangement
 (commit: d07c679)

Update breadcrumbs
 (commit: 5ed8434)

graphviewer: design and help adjustments
 (commit: b69febf)

graphviewer: no long message should not take away space
 (commit: bde1213)