Started by upstream project "faust-data-trigger" build number 66 originally caused by: Started by an SCM change Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/faust-macrogen [ssh-agent] Looking for ssh-agent implementation... [ssh-agent] Exec ssh-agent (binary ssh-agent on a remote machine) $ ssh-agent SSH_AUTH_SOCK=/tmp/ssh-UmxAVkVGwz9N/agent.22426 SSH_AGENT_PID=22428 [ssh-agent] Started. $ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_3766889646751433274.key Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_3766889646751433274.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_3766889646751433274.key) [ssh-agent] Using credentials git $ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_8895483888147646929.key Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_8895483888147646929.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_8895483888147646929.key) [ssh-agent] Using credentials jenkins (wrzh075.rzhousing.uni-wuerzburg.de) > /usr/bin/git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10 Fetching upstream changes from git://github.com/faustedition/faust-macrogen > /usr/bin/git --version # timeout=10 using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de > /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/* > /usr/bin/git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > /usr/bin/git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10 Checking out Revision 0b2f0e20473412237153994159c42e7a30656b93 (refs/remotes/origin/master) > /usr/bin/git config core.sparsecheckout # timeout=10 > /usr/bin/git checkout -f 0b2f0e20473412237153994159c42e7a30656b93 Commit message: "fixup! Ensure out directory is there" > /usr/bin/git rev-list --no-walk 0b2f0e20473412237153994159c42e7a30656b93 # timeout=10 > /usr/bin/git remote # timeout=10 > /usr/bin/git submodule init # timeout=10 > /usr/bin/git submodule sync # timeout=10 > /usr/bin/git config --get remote.origin.url # timeout=10 > /usr/bin/git submodule init # timeout=10 > /usr/bin/git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > /usr/bin/git config --get submodule.data.url # timeout=10 > /usr/bin/git config -f .gitmodules --get submodule.data.path # timeout=10 > /usr/bin/git submodule update --init --recursive --remote data $ bash -c "[ -d \$HOME/.pyenv ]" $ bash -c "cd /mnt/data/jenkins/workspace/faust-macrogen && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true" $ bash -c "mkdir \$HOME/.pyenv.lock" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv versions --bare" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv exec pip list" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "rm -rf \$HOME/.pyenv.lock" [faust-macrogen] $ /bin/sh -xe /tmp/jenkins8418618824045548356.sh + pipenv install Installing dependencies from Pipfile.lock (8f5326)… To activate this project's virtualenv, run the following: $ pipenv shell + pipenv run ./main.py /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88 return f(*args, **kwds) WARNING datings Skipping row ['Reference', 'Weight']: invalid literal for int() with base 10: 'Weight' INFO datings Reading data to build base graph ... WARNING uris Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.31_alpha (wa_faust: 2_II_H.31_) WARNING uris Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2_alpha (wa_faust: 2_III_H.2_) ERROR datings Absolute dating without a date: <date xmlns="http://www.faustedition.net/ns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> <comment>Über Rest der Handschrift keine Aussage über Datierung möglich</comment> <source uri="faust://bibliography/bohnenkamp1994">S.322</source> <item uri="faust://inscription/wa/2_I_H.10/i_uebrige"/> </date> at data/xml/macrogenesis/handschriftendatierung_i.xml:115 ERROR datings Absolute dating without a date: <date xmlns="http://www.faustedition.net/ns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> <comment>Über Rest der Handschrift keine Aussage über Datierung möglich</comment> <source uri="faust://bibliography/bohnenkamp1994">S.322</source> <item uri="faust://inscription/wa/2_I_H.10/i_v"/> </date> at data/xml/macrogenesis/handschriftendatierung_i.xml:121 ERROR datings Backwards dating (1827-12-25 .. 1817-12-25), this would have caused a conflict: <date xmlns="http://www.faustedition.net/ns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" notBefore="1827-12-25" notAfter="1817-12-25"> <comment>Datierung auf HS: Weynachten 1827; Am 25.12.1827 . . </comment> <source uri="faust://bibliography/gsa-datenbank"/> <item uri="faust://document/wa/2_I_H.f"/> </date> at data/xml/macrogenesis/handschriftendatierung_i.xml:663 INFO graph Removing hertz and temp-syn INFO graph Extracted 5 subgraphs with conflicts INFO graph Calculating minimum feedback arc set for 5 subgraphs DEBUG graph Calculating MFAS for a 2-node graph using ip, may take a while DEBUG graph 1 edges to remove DEBUG graph Calculating MFAS for a 3-node graph using ip, may take a while DEBUG graph 2 edges to remove DEBUG graph Calculating MFAS for a 4-node graph using ip, may take a while DEBUG graph 2 edges to remove DEBUG graph Calculating MFAS for a 55-node graph using eades, may take a while DEBUG graph 11 edges to remove DEBUG graph Calculating MFAS for a 693-node graph using eades, may take a while DEBUG graph 351 edges to remove WARNING graph Found 19 self loops, will also remove those. Affected nodes: 2 II H.22, 2 II H.22, 2 III H.70, 2 III H.70, 2 III H.70, 2 III H.3a:1, 2 III H.3a:1, 2 III H.50c, 2 III H.50c, fischer_lamberg: 2_III_H.15 , fischer_lamberg: 2_III_H.15 , 2 III H.76, 2 III H.76, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1 INFO graph Marking 386 conflicting edges for deletion INFO graph Building DAG from remaining data INFO graph Removed 386 of the original 3146 edges INFO graph Augmenting refs with data from graphs INFO graph Creating sort order from DAG INFO visualize Writing target/macrogenesis/help-pre.dot ... INFO visualize Writing target/macrogenesis/help-conflict.dot ... INFO visualize Writing target/macrogenesis/help-syn.dot ... INFO visualize Writing target/macrogenesis/help-dating.dot ... INFO visualize Writing target/macrogenesis/help-interval.dot ... INFO visualize Writing target/macrogenesis/help-when.dot ... INFO visualize Writing target/macrogenesis/wa.182.i_r_o-graph.dot ... 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INFO visualize Writing target/macrogenesis/conflict-324.dot ... INFO visualize Writing target/macrogenesis/conflict-325.dot ... INFO visualize Writing target/macrogenesis/conflict-326.dot ... INFO visualize Writing target/macrogenesis/conflict-327.dot ... INFO visualize Writing target/macrogenesis/conflict-328.dot ... INFO visualize Writing target/macrogenesis/conflict-329.dot ... INFO visualize Writing target/macrogenesis/conflict-330.dot ... INFO visualize Writing target/macrogenesis/conflict-331.dot ... INFO visualize Writing target/macrogenesis/conflict-332.dot ... INFO visualize Writing target/macrogenesis/conflict-333.dot ... INFO visualize Writing target/macrogenesis/conflict-334.dot ... INFO visualize Writing target/macrogenesis/conflict-335.dot ... INFO visualize Writing target/macrogenesis/conflict-336.dot ... INFO visualize Writing target/macrogenesis/conflict-337.dot ... INFO visualize Writing target/macrogenesis/conflict-338.dot ... 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INFO visualize Writing target/macrogenesis/conflict-354.dot ... INFO visualize Writing target/macrogenesis/conflict-355.dot ... INFO visualize Writing target/macrogenesis/conflict-356.dot ... INFO visualize Writing target/macrogenesis/conflict-357.dot ... INFO visualize Writing target/macrogenesis/conflict-358.dot ... INFO visualize Writing target/macrogenesis/conflict-359.dot ... INFO visualize Writing target/macrogenesis/conflict-360.dot ... INFO visualize Writing target/macrogenesis/conflict-361.dot ... INFO visualize Writing target/macrogenesis/conflict-362.dot ... INFO visualize Writing target/macrogenesis/conflict-363.dot ... INFO visualize Writing target/macrogenesis/conflict-364.dot ... INFO visualize Writing target/macrogenesis/conflict-365.dot ... INFO visualize Writing target/macrogenesis/conflict-366.dot ... INFO visualize Writing target/macrogenesis/conflict-367.dot ... INFO visualize Writing target/macrogenesis/conflict-368.dot ... INFO visualize Writing target/macrogenesis/conflict-369.dot ... Rendering: 0%| | 0/1021 [00:00<?, ? SVGs/s] Rendering: 1%| | 8/1021 [00:00<00:13, 76.94 SVGs/s] Rendering: 2%|▏ | 22/1021 [00:00<00:09, 105.78 SVGs/s] Rendering: 4%|▍ | 41/1021 [00:00<00:07, 133.12 SVGs/s] Rendering: 6%|▌ | 58/1021 [00:00<00:07, 136.77 SVGs/s] Rendering: 7%|▋ | 75/1021 [00:00<00:06, 142.74 SVGs/s] Rendering: 9%|▉ | 94/1021 [00:00<00:06, 145.21 SVGs/s]ERROR visualize Failed to render target/macrogenesis/2_III_H.76-graph.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1335, in _run_prog raise IOError(b"".join(errors)) OSError: b'libpath/shortest.c:324: triangulation failed\nlibpath/shortest.c:192: source point not in any triangle\n' Rendering: 11%|█ | 112/1021 [00:00<00:06, 148.50 SVGs/s] Rendering: 13%|█▎ | 130/1021 [00:00<00:05, 152.08 SVGs/s] Rendering: 14%|█▍ | 146/1021 [00:00<00:05, 152.72 SVGs/s] Rendering: 16%|█▌ | 162/1021 [00:01<00:05, 153.32 SVGs/s] Rendering: 17%|█▋ | 178/1021 [00:01<00:05, 153.83 SVGs/s] Rendering: 19%|█▉ | 196/1021 [00:01<00:05, 155.48 SVGs/s] Rendering: 21%|██ | 213/1021 [00:01<00:05, 156.09 SVGs/s] Rendering: 23%|██▎ | 230/1021 [00:01<00:05, 156.79 SVGs/s] Rendering: 24%|██▍ | 247/1021 [00:01<00:04, 156.62 SVGs/s] Rendering: 26%|██▌ | 264/1021 [00:01<00:04, 155.97 SVGs/s] Rendering: 27%|██▋ | 280/1021 [00:01<00:04, 153.90 SVGs/s] Rendering: 29%|██▉ | 296/1021 [00:01<00:04, 154.20 SVGs/s] Rendering: 31%|███ | 313/1021 [00:02<00:04, 153.54 SVGs/s] Rendering: 32%|███▏ | 330/1021 [00:02<00:04, 153.92 SVGs/s] Rendering: 34%|███▍ | 346/1021 [00:02<00:04, 154.16 SVGs/s] Rendering: 35%|███▌ | 362/1021 [00:02<00:04, 152.56 SVGs/s] Rendering: 37%|███▋ | 377/1021 [00:02<00:04, 151.90 SVGs/s] Rendering: 38%|███▊ | 393/1021 [00:02<00:04, 152.02 SVGs/s] Rendering: 40%|███▉ | 408/1021 [00:02<00:04, 151.55 SVGs/s] Rendering: 41%|████▏ | 423/1021 [00:02<00:03, 151.31 SVGs/s] Rendering: 43%|████▎ | 440/1021 [00:02<00:03, 151.56 SVGs/s] Rendering: 45%|████▍ | 457/1021 [00:03<00:03, 151.72 SVGs/s] Rendering: 47%|████▋ | 475/1021 [00:03<00:03, 152.56 SVGs/s] Rendering: 48%|████▊ | 491/1021 [00:03<00:03, 152.47 SVGs/s] Rendering: 50%|████▉ | 509/1021 [00:03<00:03, 152.79 SVGs/s] Rendering: 51%|█████▏ | 525/1021 [00:03<00:03, 152.33 SVGs/s] Rendering: 53%|█████▎ | 544/1021 [00:03<00:03, 153.12 SVGs/s] Rendering: 55%|█████▍ | 561/1021 [00:03<00:03, 153.21 SVGs/s] Rendering: 57%|█████▋ | 577/1021 [00:03<00:02, 153.19 SVGs/s] Rendering: 58%|█████▊ | 593/1021 [00:03<00:02, 153.33 SVGs/s]ERROR visualize Failed to render target/macrogenesis/faustedition.2_V_H.33.i_uebrige-graph.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object Rendering: 60%|█████▉ | 609/1021 [00:03<00:02, 153.14 SVGs/s] Rendering: 61%|██████ | 625/1021 [00:04<00:02, 153.22 SVGs/s] Rendering: 63%|██████▎ | 641/1021 [00:04<00:02, 152.58 SVGs/s] Rendering: 64%|██████▍ | 656/1021 [00:04<00:02, 145.11 SVGs/s] Rendering: 65%|██████▌ | 668/1021 [00:04<00:02, 140.34 SVGs/s] Rendering: 67%|██████▋ | 680/1021 [00:04<00:02, 139.65 SVGs/s]ERROR visualize Failed to render target/macrogenesis/conflict-033.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1335, in _run_prog raise IOError(b"".join(errors)) OSError: b'libpath/shortest.c:324: triangulation failed\nlibpath/shortest.c:192: source point not in any triangle\n' ERROR visualize Failed to render target/macrogenesis/conflict-034.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object Rendering: 68%|██████▊ | 696/1021 [00:04<00:02, 139.56 SVGs/s]ERROR visualize Failed to render target/macrogenesis/conflict-055.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object Rendering: 69%|██████▉ | 708/1021 [00:05<00:02, 137.24 SVGs/s]ERROR visualize Failed to render target/macrogenesis/conflict-064.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object ERROR visualize Failed to render target/macrogenesis/conflict-065.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object Rendering: 70%|███████ | 718/1021 [00:05<00:02, 135.35 SVGs/s] Rendering: 71%|███████▏ | 728/1021 [00:05<00:02, 134.57 SVGs/s] Rendering: 72%|███████▏ | 739/1021 [00:05<00:02, 132.65 SVGs/s] Rendering: 73%|███████▎ | 748/1021 [00:05<00:02, 128.72 SVGs/s] Rendering: 74%|███████▍ | 756/1021 [00:06<00:02, 125.17 SVGs/s] Rendering: 75%|███████▍ | 763/1021 [00:06<00:02, 124.17 SVGs/s] Rendering: 76%|███████▌ | 773/1021 [00:06<00:02, 123.77 SVGs/s] Rendering: 76%|███████▋ | 781/1021 [00:06<00:01, 122.96 SVGs/s] Rendering: 77%|███████▋ | 789/1021 [00:06<00:01, 120.60 SVGs/s] Rendering: 78%|███████▊ | 796/1021 [00:06<00:01, 119.24 SVGs/s] Rendering: 79%|███████▊ | 804/1021 [00:06<00:01, 118.46 SVGs/s] Rendering: 80%|███████▉ | 813/1021 [00:06<00:01, 118.01 SVGs/s] Rendering: 80%|████████ | 821/1021 [00:06<00:01, 117.29 SVGs/s] Rendering: 81%|████████ | 829/1021 [00:07<00:01, 115.25 SVGs/s] Rendering: 82%|████████▏ | 840/1021 [00:07<00:01, 114.43 SVGs/s] Rendering: 83%|████████▎ | 847/1021 [00:07<00:01, 111.84 SVGs/s] Rendering: 84%|████████▎ | 853/1021 [00:07<00:01, 110.81 SVGs/s] Rendering: 84%|████████▍ | 860/1021 [00:07<00:01, 110.11 SVGs/s] Rendering: 85%|████████▌ | 868/1021 [00:07<00:01, 108.88 SVGs/s] Rendering: 86%|████████▌ | 875/1021 [00:08<00:01, 108.13 SVGs/s] Rendering: 86%|████████▋ | 881/1021 [00:08<00:01, 107.37 SVGs/s] Rendering: 87%|████████▋ | 887/1021 [00:08<00:01, 106.51 SVGs/s] Rendering: 87%|████████▋ | 893/1021 [00:08<00:01, 105.34 SVGs/s] Rendering: 88%|████████▊ | 898/1021 [00:08<00:01, 104.47 SVGs/s] Rendering: 88%|████████▊ | 903/1021 [00:08<00:01, 103.70 SVGs/s] Rendering: 89%|████████▉ | 911/1021 [00:08<00:01, 103.26 SVGs/s] Rendering: 90%|█████████ | 922/1021 [00:08<00:00, 103.31 SVGs/s] Rendering: 91%|█████████ | 929/1021 [00:09<00:00, 102.03 SVGs/s] Rendering: 92%|█████████▏| 940/1021 [00:09<00:00, 102.12 SVGs/s] Rendering: 93%|█████████▎| 950/1021 [00:09<00:00, 101.98 SVGs/s] Rendering: 95%|█████████▍| 965/1021 [00:09<00:00, 102.47 SVGs/s] Rendering: 95%|█████████▌| 975/1021 [00:09<00:00, 101.82 SVGs/s] Rendering: 97%|█████████▋| 989/1021 [00:09<00:00, 101.95 SVGs/s]ERROR visualize Failed to render target/macrogenesis/conflict-346.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object ERROR visualize Failed to render target/macrogenesis/conflict-347.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object ERROR visualize Failed to render target/macrogenesis/conflict-345.dot Traceback (most recent call last): File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 140, in render_file graph.draw(resultfn, format='svg', prog='dot') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1474, in draw data = self._run_prog(prog, args) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1338, in _run_prog warnings.warn(b"".join(errors), RuntimeWarning) TypeError: cannot use a string pattern on a bytes-like object Rendering: 98%|█████████▊| 1001/1021 [00:09<00:00, 101.77 SVGs/s] Rendering: 99%|█████████▉| 1011/1021 [00:09<00:00, 101.31 SVGs/s] Rendering: 100%|█████████▉| 1020/1021 [00:10<00:00, 101.02 SVGs/s] Rendering: 100%|██████████| 1021/1021 [00:10<00:00, 101.11 SVGs/s] INFO visualize Rendered 1011 SVGs, 10 failed + cd target + rsync -a -u --chmod=ug+rwX,o+rX,Dg+s --omit-dir-times --info=del,stats2,copy,flist2 macrogenesis beta.faustedition.net:/var/www/dev/ sending incremental file list rsync: failed to set permissions on "/var/www/dev/macrogenesis": Operation not permitted (1) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.12-graph.dot.USu43j" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.12-graph.svg.yq5MAd" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.12.php.iO8v76" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.13-graph.dot.qlvfE0" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.13-graph.svg.09hZaU" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.13.php.hFrJHN" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.14-graph.dot.PrRteH" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.14-graph.svg.SsBeLA" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.14.php.yPzZhu" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.15-graph.dot.h5QKOn" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.15-graph.svg.pjpwlh" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.15.php.cThiSa" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.16-graph.dot.M6s4o4" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.16-graph.svg.He2QVX" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.16.php.4mSDsR" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.17-graph.dot.b6WqZK" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.17-graph.svg.rWhewE" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.17.php.ART12x" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.3-graph.dot.nEMPzr" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.3-graph.svg.u0VD6k" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.3.php.GWfsDe" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.4-graph.dot.22Hga8" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.4-graph.svg.DCo5G1" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.4.php.DsxUdV" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.5-graph.dot.2nNJKO" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.5-graph.svg.XUgzhI" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.1_H.5.php.dXVoOB" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_H-graph.dot.FwHelv" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_H-graph.svg.HWvjTo" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_H.php.oH32si" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.1-graph.dot.VcoN2b" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.1-graph.svg.w1BHC5" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.1.php.ienxdZ" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.10-graph.dot.m5MnOS" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.10-graph.svg.vzqepM" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.10.php.3Js5ZF" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.11-graph.dot.IjKWAz" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.11-graph.svg.auvVbt" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.11.php.wM5UMm" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.12-graph.dot.zASUng" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.12-graph.svg.b4VUY9" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.12.php.qqzZz3" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.13-graph.dot.cPA4aX" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.13-graph.svg.ELcaMQ" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.13.php.J73jnK" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.14-graph.dot.WD7tYD" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.14-graph.svg.VPNEzx" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.14.php.zZMSar" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.15-graph.dot.niZ6Lk" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.15-graph.svg.mTEpne" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.15.php.yvcMY7" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.16-graph.dot.QCX8z1" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.16-graph.svg.avJybV" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.16.php.PXmZMO" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.2_III_H.17-graph.dot.IQ9poI" failed: Permission denied 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(13) rsync: mkstemp "/var/www/dev/macrogenesis/.wa.Q-graph.svg.nfgq3o" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wa.Q.php.EsiViq" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-01.dot.flAqyr" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-02.dot.h4PVQs" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-02.svg.GOFr9t" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-03.dot.5vKXrv" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-03.svg.UNYtKw" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-04.dot.8Gt02x" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-04.svg.6C5wlz" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-05.dot.V563DA" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.wcc-05.svg.HW4CWB" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.working.dot.DmecfD" failed: Permission denied (13) rsync: mkstemp "/var/www/dev/macrogenesis/.working.yaml.EuHKAE" failed: Permission denied (13) Number of files: 2,694 (reg: 2,693, dir: 1) Number of created files: 16 (reg: 16) Number of deleted files: 0 Number of regular files transferred: 2,693 Total file size: 91,965,362 bytes Total transferred file size: 91,965,362 bytes Literal data: 87,506,446 bytes Matched data: 4,458,916 bytes File list size: 65,533 File list generation time: 0.001 seconds File list transfer time: 0.000 seconds Total bytes sent: 87,751,687 Total bytes received: 1,103,461 sent 87,751,687 bytes received 1,103,461 bytes 19,745,588.44 bytes/sec total size is 91,965,362 speedup is 1.04 rsync error: some files/attrs were not transferred (see previous errors) (code 23) at main.c(1196) [sender=3.1.2] Build step 'Execute shell' marked build as failure $ ssh-agent -k unset SSH_AUTH_SOCK; unset SSH_AGENT_PID; echo Agent pid 22428 killed; [ssh-agent] Stopped. [BFA] Scanning build for known causes... [BFA] No failure causes found [BFA] Done. 0s Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds Notifying upstream projects of job completion Finished: FAILURE