Failed

integration_test.jupyter_integration_test (from nosetests)

Failing for the past 23 builds (Since #1 )

Took 4.1 sec.

Error Message

Command '['jupyter-nbconvert', '--execute', '--log-level=ERROR', '--ExecutePreprocessor.iopub_timeout=30', '--ExecutePreprocessor.timeout=None', '/mnt/data/jenkins/workspace/DARIAH-Topics/IntegrationTest_v01.ipynb']' returned non-zero exit status 1
-------------------- >> begin captured logging << --------------------
root: ERROR: [NbConvertApp] ERROR | Error while converting '/mnt/data/jenkins/workspace/DARIAH-Topics/IntegrationTest_v01.ipynb'
Traceback (most recent call last):
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/nbconvertapp.py", line 373, in export_single_notebook
    output, resources = self.exporter.from_filename(notebook_filename, resources=resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 171, in from_filename
    return self.from_file(f, resources=resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 189, in from_file
    return self.from_notebook_node(nbformat.read(file_stream, as_version=4), resources=resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/html.py", line 69, in from_notebook_node
    return super(HTMLExporter, self).from_notebook_node(nb, resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/templateexporter.py", line 236, in from_notebook_node
    nb_copy, resources = super(TemplateExporter, self).from_notebook_node(nb, resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 131, in from_notebook_node
    nb_copy, resources = self._preprocess(nb_copy, resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 308, in _preprocess
    nbc, resc = preprocessor(nbc, resc)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/base.py", line 47, in __call__
    return self.preprocess(nb,resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/execute.py", line 211, in preprocess
    nb, resources = super(ExecutePreprocessor, self).preprocess(nb, resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/base.py", line 70, in preprocess
    nb.cells[index], resources = self.preprocess_cell(cell, resources, index)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/execute.py", line 242, in preprocess_cell
    raise CellExecutionError(msg)
nbconvert.preprocessors.execute.CellExecutionError: An error occurred while executing the following cell:
------------------
import os.path
basepath =  os.path.abspath(os.path.join(".", os.pardir))

with open(os.path.join(basepath, "Topics/tutorial_supplementals/stopwords/en"), 'r', encoding = 'utf-8') as f: 
    stopword_list = f.read().split('\n')
    
stopword_list = set(stopword_list)
------------------

FileNotFoundError: [Errno 2] No such file or directory: '/mnt/data/jenkins/workspace/Topics/tutorial_supplementals/stopwords/en'


--------------------- >> end captured logging << ---------------------

Stacktrace

  File "/usr/lib/python3.5/unittest/case.py", line 59, in testPartExecutor
    yield
  File "/usr/lib/python3.5/unittest/case.py", line 601, in run
    testMethod()
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nose/case.py", line 198, in runTest
    self.test(*self.arg)
  File "/mnt/data/jenkins/workspace/DARIAH-Topics/test/integration_test.py", line 19, in jupyter_integration_test
    stderr=STDOUT, universal_newlines=True)
  File "/usr/lib/python3.5/subprocess.py", line 316, in check_output
    **kwargs).stdout
  File "/usr/lib/python3.5/subprocess.py", line 398, in run
    output=stdout, stderr=stderr)
Command '['jupyter-nbconvert', '--execute', '--log-level=ERROR', '--ExecutePreprocessor.iopub_timeout=30', '--ExecutePreprocessor.timeout=None', '/mnt/data/jenkins/workspace/DARIAH-Topics/IntegrationTest_v01.ipynb']' returned non-zero exit status 1
-------------------- >> begin captured logging << --------------------
root: ERROR: [NbConvertApp] ERROR | Error while converting '/mnt/data/jenkins/workspace/DARIAH-Topics/IntegrationTest_v01.ipynb'
Traceback (most recent call last):
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/nbconvertapp.py", line 373, in export_single_notebook
    output, resources = self.exporter.from_filename(notebook_filename, resources=resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 171, in from_filename
    return self.from_file(f, resources=resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 189, in from_file
    return self.from_notebook_node(nbformat.read(file_stream, as_version=4), resources=resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/html.py", line 69, in from_notebook_node
    return super(HTMLExporter, self).from_notebook_node(nb, resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/templateexporter.py", line 236, in from_notebook_node
    nb_copy, resources = super(TemplateExporter, self).from_notebook_node(nb, resources, **kw)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 131, in from_notebook_node
    nb_copy, resources = self._preprocess(nb_copy, resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/exporters/exporter.py", line 308, in _preprocess
    nbc, resc = preprocessor(nbc, resc)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/base.py", line 47, in __call__
    return self.preprocess(nb,resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/execute.py", line 211, in preprocess
    nb, resources = super(ExecutePreprocessor, self).preprocess(nb, resources)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/base.py", line 70, in preprocess
    nb.cells[index], resources = self.preprocess_cell(cell, resources, index)
  File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/nbconvert/preprocessors/execute.py", line 242, in preprocess_cell
    raise CellExecutionError(msg)
nbconvert.preprocessors.execute.CellExecutionError: An error occurred while executing the following cell:
------------------
import os.path
basepath =  os.path.abspath(os.path.join(".", os.pardir))

with open(os.path.join(basepath, "Topics/tutorial_supplementals/stopwords/en"), 'r', encoding = 'utf-8') as f: 
    stopword_list = f.read().split('\n')
    
stopword_list = set(stopword_list)
------------------

FileNotFoundError: [Errno 2] No such file or directory: '/mnt/data/jenkins/workspace/Topics/tutorial_supplementals/stopwords/en'


--------------------- >> end captured logging << ---------------------