Console Output
Started by GitHub push by MHuberFaust
Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/DARIAH-Topics
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/DARIAH-DE/Topics # timeout=10
Fetching upstream changes from https://github.com/DARIAH-DE/Topics
> git --version # timeout=10
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/DARIAH-DE/Topics +refs/heads/*:refs/remotes/origin/*
> git rev-parse refs/remotes/origin/testing^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/testing^{commit} # timeout=10
Checking out Revision 04b857dce07574e2b2ed31d85669b3f3af59bd3f (refs/remotes/origin/testing)
> git config core.sparsecheckout # timeout=10
> git checkout -f 04b857dce07574e2b2ed31d85669b3f3af59bd3f
Commit message: "next try..."
> git rev-list 78d2aed7a6f67f30f98b924ffe814f683f41f5ec # timeout=10
[DARIAH-Topics] $ /usr/bin/python3 /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenv.py /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9
Using base prefix '/usr'
New python executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python3
Also creating executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python
Installing setuptools, pip, wheel...done.
[DARIAH-Topics] $ /bin/sh -xe /tmp/shiningpanda4166750899877375268.sh
+ pip install -U pip
Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages
+ pip install -U -r requirements-dev.txt
Obtaining file:///mnt/data/jenkins/workspace/DARIAH-Topics (from -r requirements.txt (line 1))
Collecting pytest (from -r requirements-dev.txt (line 4))
Using cached pytest-3.4.0-py2.py3-none-any.whl
Collecting pytest-cov (from -r requirements-dev.txt (line 5))
Using cached pytest_cov-2.5.1-py2.py3-none-any.whl
Collecting pytest-nbsmoke (from -r requirements-dev.txt (line 6))
Using cached pytest_nbsmoke-0.1.6-py2.py3-none-any.whl
Collecting jupyter (from -r requirements-dev.txt (line 9))
Using cached jupyter-1.0.0-py2.py3-none-any.whl
Collecting sphinx (from -r requirements-dev.txt (line 10))
Downloading Sphinx-1.7.0-py2.py3-none-any.whl (1.9MB)
Collecting nbsphinx from git+https://github.com/spatialaudio/nbsphinx#egg=nbsphinx (from -r requirements-dev.txt (line 11))
Cloning https://github.com/spatialaudio/nbsphinx to /tmp/pip-build-c_1abadb/nbsphinx
Collecting recommonmark (from -r requirements-dev.txt (line 12))
Using cached recommonmark-0.4.0-py2.py3-none-any.whl
Collecting pyinstaller (from -r requirements-dev.txt (line 15))
Collecting pandas>=0.19.2 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached pandas-0.22.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting regex>=2017.01.14 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Downloading regex-2018.02.08.tar.gz (620kB)
Collecting gensim>=0.13.2 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Downloading gensim-3.3.0-cp35-cp35m-manylinux1_x86_64.whl (22.5MB)
Collecting lda>=1.0.5 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached lda-1.0.5-cp35-cp35m-manylinux1_x86_64.whl
Collecting numpy>=1.3 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached numpy-1.14.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting lxml>=3.6.4 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached lxml-4.1.1-cp35-cp35m-manylinux1_x86_64.whl
Collecting flask>=0.11.1 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached Flask-0.12.2-py2.py3-none-any.whl
Collecting matplotlib>=1.5.3 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached matplotlib-2.1.2-cp35-cp35m-manylinux1_x86_64.whl
Collecting bokeh>=0.12.6 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Downloading bokeh-0.12.14.tar.gz (15.4MB)
Collecting wordcloud>=1.3.1 (from dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Collecting attrs>=17.2.0 (from pytest->-r requirements-dev.txt (line 4))
Using cached attrs-17.4.0-py2.py3-none-any.whl
Collecting pluggy<0.7,>=0.5 (from pytest->-r requirements-dev.txt (line 4))
Collecting py>=1.5.0 (from pytest->-r requirements-dev.txt (line 4))
Using cached py-1.5.2-py2.py3-none-any.whl
Collecting six>=1.10.0 (from pytest->-r requirements-dev.txt (line 4))
Using cached six-1.11.0-py2.py3-none-any.whl
Requirement already up-to-date: setuptools in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages (from pytest->-r requirements-dev.txt (line 4))
Collecting coverage>=3.7.1 (from pytest-cov->-r requirements-dev.txt (line 5))
Downloading coverage-4.5.1-cp35-cp35m-manylinux1_x86_64.whl (202kB)
Collecting jupyter-client (from pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached jupyter_client-5.2.2-py2.py3-none-any.whl
Collecting pyflakes (from pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached pyflakes-1.6.0-py2.py3-none-any.whl
Collecting nbconvert (from pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached nbconvert-5.3.1-py2.py3-none-any.whl
Collecting ipykernel (from pytest-nbsmoke->-r requirements-dev.txt (line 6))
Downloading ipykernel-4.8.1-py3-none-any.whl (108kB)
Collecting nbformat (from pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached nbformat-4.4.0-py2.py3-none-any.whl
Collecting jupyter-console (from jupyter->-r requirements-dev.txt (line 9))
Using cached jupyter_console-5.2.0-py2.py3-none-any.whl
Collecting notebook (from jupyter->-r requirements-dev.txt (line 9))
Using cached notebook-5.4.0-py2.py3-none-any.whl
Collecting qtconsole (from jupyter->-r requirements-dev.txt (line 9))
Using cached qtconsole-4.3.1-py2.py3-none-any.whl
Collecting ipywidgets (from jupyter->-r requirements-dev.txt (line 9))
Using cached ipywidgets-7.1.1-py2.py3-none-any.whl
Collecting snowballstemmer>=1.1 (from sphinx->-r requirements-dev.txt (line 10))
Using cached snowballstemmer-1.2.1-py2.py3-none-any.whl
Collecting docutils>=0.11 (from sphinx->-r requirements-dev.txt (line 10))
Using cached docutils-0.14-py3-none-any.whl
Collecting babel!=2.0,>=1.3 (from sphinx->-r requirements-dev.txt (line 10))
Using cached Babel-2.5.3-py2.py3-none-any.whl
Collecting requests>=2.0.0 (from sphinx->-r requirements-dev.txt (line 10))
Using cached requests-2.18.4-py2.py3-none-any.whl
Collecting sphinxcontrib-websupport (from sphinx->-r requirements-dev.txt (line 10))
Using cached sphinxcontrib_websupport-1.0.1-py2.py3-none-any.whl
Collecting Jinja2>=2.3 (from sphinx->-r requirements-dev.txt (line 10))
Using cached Jinja2-2.10-py2.py3-none-any.whl
Collecting packaging (from sphinx->-r requirements-dev.txt (line 10))
Using cached packaging-16.8-py2.py3-none-any.whl
Collecting Pygments>=2.0 (from sphinx->-r requirements-dev.txt (line 10))
Using cached Pygments-2.2.0-py2.py3-none-any.whl
Collecting alabaster<0.8,>=0.7 (from sphinx->-r requirements-dev.txt (line 10))
Using cached alabaster-0.7.10-py2.py3-none-any.whl
Collecting imagesize (from sphinx->-r requirements-dev.txt (line 10))
Using cached imagesize-0.7.1-py2.py3-none-any.whl
Collecting traitlets (from nbsphinx->-r requirements-dev.txt (line 11))
Using cached traitlets-4.3.2-py2.py3-none-any.whl
Collecting commonmark<=0.5.4 (from recommonmark->-r requirements-dev.txt (line 12))
Collecting pefile>=2017.8.1 (from pyinstaller->-r requirements-dev.txt (line 15))
Collecting macholib>=1.8 (from pyinstaller->-r requirements-dev.txt (line 15))
Using cached macholib-1.9-py2.py3-none-any.whl
Collecting pytz>=2011k (from pandas>=0.19.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Downloading pytz-2018.3-py2.py3-none-any.whl (509kB)
Collecting python-dateutil>=2 (from pandas>=0.19.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached python_dateutil-2.6.1-py2.py3-none-any.whl
Collecting smart-open>=1.2.1 (from gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Collecting scipy>=0.18.1 (from gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached scipy-1.0.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting pbr>=0.6 (from lda>=1.0.5->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached pbr-3.1.1-py2.py3-none-any.whl
Collecting click>=2.0 (from flask>=0.11.1->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached click-6.7-py2.py3-none-any.whl
Collecting itsdangerous>=0.21 (from flask>=0.11.1->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Collecting Werkzeug>=0.7 (from flask>=0.11.1->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached Werkzeug-0.14.1-py2.py3-none-any.whl
Collecting pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 (from matplotlib>=1.5.3->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached pyparsing-2.2.0-py2.py3-none-any.whl
Collecting cycler>=0.10 (from matplotlib>=1.5.3->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached cycler-0.10.0-py2.py3-none-any.whl
Collecting PyYAML>=3.10 (from bokeh>=0.12.6->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Collecting tornado>=4.3 (from bokeh>=0.12.6->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Collecting pillow (from wordcloud>=1.3.1->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached Pillow-5.0.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting jupyter-core (from jupyter-client->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached jupyter_core-4.4.0-py2.py3-none-any.whl
Collecting pyzmq>=13 (from jupyter-client->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Downloading pyzmq-17.0.0-cp35-cp35m-manylinux1_x86_64.whl (3.1MB)
Collecting entrypoints>=0.2.2 (from nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached entrypoints-0.2.3-py2.py3-none-any.whl
Collecting pandocfilters>=1.4.1 (from nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Collecting testpath (from nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached testpath-0.3.1-py2.py3-none-any.whl
Collecting mistune>=0.7.4 (from nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached mistune-0.8.3-py2.py3-none-any.whl
Collecting bleach (from nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached bleach-2.1.2-py2.py3-none-any.whl
Collecting ipython>=4.0.0 (from ipykernel->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached ipython-6.2.1-py3-none-any.whl
Collecting jsonschema!=2.5.0,>=2.4 (from nbformat->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached jsonschema-2.6.0-py2.py3-none-any.whl
Collecting ipython-genutils (from nbformat->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached ipython_genutils-0.2.0-py2.py3-none-any.whl
Collecting prompt-toolkit<2.0.0,>=1.0.0 (from jupyter-console->jupyter->-r requirements-dev.txt (line 9))
Using cached prompt_toolkit-1.0.15-py3-none-any.whl
Collecting Send2Trash (from notebook->jupyter->-r requirements-dev.txt (line 9))
Using cached Send2Trash-1.4.2-py3-none-any.whl
Collecting terminado>=0.8.1 (from notebook->jupyter->-r requirements-dev.txt (line 9))
Using cached terminado-0.8.1-py2.py3-none-any.whl
Collecting widgetsnbextension~=3.1.0 (from ipywidgets->jupyter->-r requirements-dev.txt (line 9))
Using cached widgetsnbextension-3.1.3-py2.py3-none-any.whl
Collecting certifi>=2017.4.17 (from requests>=2.0.0->sphinx->-r requirements-dev.txt (line 10))
Using cached certifi-2018.1.18-py2.py3-none-any.whl
Collecting urllib3<1.23,>=1.21.1 (from requests>=2.0.0->sphinx->-r requirements-dev.txt (line 10))
Using cached urllib3-1.22-py2.py3-none-any.whl
Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.0.0->sphinx->-r requirements-dev.txt (line 10))
Using cached chardet-3.0.4-py2.py3-none-any.whl
Collecting idna<2.7,>=2.5 (from requests>=2.0.0->sphinx->-r requirements-dev.txt (line 10))
Using cached idna-2.6-py2.py3-none-any.whl
Collecting MarkupSafe>=0.23 (from Jinja2>=2.3->sphinx->-r requirements-dev.txt (line 10))
Collecting decorator (from traitlets->nbsphinx->-r requirements-dev.txt (line 11))
Using cached decorator-4.2.1-py2.py3-none-any.whl
Collecting future (from pefile>=2017.8.1->pyinstaller->-r requirements-dev.txt (line 15))
Collecting altgraph>=0.15 (from macholib>=1.8->pyinstaller->-r requirements-dev.txt (line 15))
Using cached altgraph-0.15-py2.py3-none-any.whl
Collecting bz2file (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Collecting boto3 (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Downloading boto3-1.5.27-py2.py3-none-any.whl (128kB)
Collecting boto>=2.32 (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached boto-2.48.0-py2.py3-none-any.whl
Collecting html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre (from bleach->nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached html5lib-1.0.1-py2.py3-none-any.whl
Collecting pickleshare (from ipython>=4.0.0->ipykernel->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached pickleshare-0.7.4-py2.py3-none-any.whl
Collecting simplegeneric>0.8 (from ipython>=4.0.0->ipykernel->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Collecting pexpect; sys_platform != "win32" (from ipython>=4.0.0->ipykernel->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Downloading pexpect-4.4.0-py2.py3-none-any.whl (56kB)
Collecting jedi>=0.10 (from ipython>=4.0.0->ipykernel->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached jedi-0.11.1-py2.py3-none-any.whl
Collecting wcwidth (from prompt-toolkit<2.0.0,>=1.0.0->jupyter-console->jupyter->-r requirements-dev.txt (line 9))
Using cached wcwidth-0.1.7-py2.py3-none-any.whl
Collecting ptyprocess; os_name != "nt" (from terminado>=0.8.1->notebook->jupyter->-r requirements-dev.txt (line 9))
Using cached ptyprocess-0.5.2-py2.py3-none-any.whl
Collecting jmespath<1.0.0,>=0.7.1 (from boto3->smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached jmespath-0.9.3-py2.py3-none-any.whl
Collecting s3transfer<0.2.0,>=0.1.10 (from boto3->smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Using cached s3transfer-0.1.12-py2.py3-none-any.whl
Collecting botocore<1.9.0,>=1.8.41 (from boto3->smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.5.0.dev1->-r requirements.txt (line 1))
Downloading botocore-1.8.41-py2.py3-none-any.whl (4.1MB)
Collecting webencodings (from html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre->bleach->nbconvert->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached webencodings-0.5.1-py2.py3-none-any.whl
Collecting parso==0.1.1 (from jedi>=0.10->ipython>=4.0.0->ipykernel->pytest-nbsmoke->-r requirements-dev.txt (line 6))
Using cached parso-0.1.1-py2.py3-none-any.whl
Building wheels for collected packages: regex, bokeh
Running setup.py bdist_wheel for regex: started
Running setup.py bdist_wheel for regex: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/bc/9f/af/f1f6e517b4f9f4f80aefaedbbff1d6843882295bc17b0e8555
Running setup.py bdist_wheel for bokeh: started
Running setup.py bdist_wheel for bokeh: finished with status 'done'
Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/e1/7c/57/11a9006179bd0fa4c26b964644c862c2862d011278c67f2ee8
Successfully built regex bokeh
Installing collected packages: attrs, pluggy, py, six, pytest, coverage, pytest-cov, python-dateutil, decorator, ipython-genutils, traitlets, jupyter-core, pyzmq, tornado, jupyter-client, pyflakes, entrypoints, Pygments, jsonschema, nbformat, pandocfilters, testpath, mistune, webencodings, html5lib, bleach, MarkupSafe, Jinja2, nbconvert, wcwidth, prompt-toolkit, pickleshare, simplegeneric, ptyprocess, pexpect, parso, jedi, ipython, ipykernel, pytest-nbsmoke, jupyter-console, Send2Trash, terminado, notebook, qtconsole, widgetsnbextension, ipywidgets, jupyter, snowballstemmer, docutils, pytz, babel, certifi, urllib3, chardet, idna, requests, sphinxcontrib-websupport, pyparsing, packaging, alabaster, imagesize, sphinx, nbsphinx, commonmark, recommonmark, future, pefile, altgraph, macholib, pyinstaller, numpy, pandas, regex, bz2file, jmespath, botocore, s3transfer, boto3, boto, smart-open, scipy, gensim, pbr, lda, lxml, click, itsdangerous, Werkzeug, flask, cycler, matplotlib, PyYAML, bokeh, pillow, wordcloud, dariah-topics
Running setup.py install for nbsphinx: started
Running setup.py install for nbsphinx: finished with status 'done'
Running setup.py develop for dariah-topics
Successfully installed Jinja2-2.10 MarkupSafe-1.0 PyYAML-3.12 Pygments-2.2.0 Send2Trash-1.4.2 Werkzeug-0.14.1 alabaster-0.7.10 altgraph-0.15 attrs-17.4.0 babel-2.5.3 bleach-2.1.2 bokeh-0.12.14 boto-2.48.0 boto3-1.5.27 botocore-1.8.41 bz2file-0.98 certifi-2018.1.18 chardet-3.0.4 click-6.7 commonmark-0.5.4 coverage-4.5.1 cycler-0.10.0 dariah-topics decorator-4.2.1 docutils-0.14 entrypoints-0.2.3 flask-0.12.2 future-0.16.0 gensim-3.3.0 html5lib-1.0.1 idna-2.6 imagesize-0.7.1 ipykernel-4.8.1 ipython-6.2.1 ipython-genutils-0.2.0 ipywidgets-7.1.1 itsdangerous-0.24 jedi-0.11.1 jmespath-0.9.3 jsonschema-2.6.0 jupyter-1.0.0 jupyter-client-5.2.2 jupyter-console-5.2.0 jupyter-core-4.4.0 lda-1.0.5 lxml-4.1.1 macholib-1.9 matplotlib-2.1.2 mistune-0.8.3 nbconvert-5.3.1 nbformat-4.4.0 nbsphinx-0.3.1 notebook-5.4.0 numpy-1.14.0 packaging-16.8 pandas-0.22.0 pandocfilters-1.4.2 parso-0.1.1 pbr-3.1.1 pefile-2017.11.5 pexpect-4.4.0 pickleshare-0.7.4 pillow-5.0.0 pluggy-0.6.0 prompt-toolkit-1.0.15 ptyprocess-0.5.2 py-1.5.2 pyflakes-1.6.0 pyinstaller-3.3.1 pyparsing-2.2.0 pytest-3.4.0 pytest-cov-2.5.1 pytest-nbsmoke-0.1.6 python-dateutil-2.6.1 pytz-2018.3 pyzmq-17.0.0 qtconsole-4.3.1 recommonmark-0.4.0 regex-2018.2.8 requests-2.18.4 s3transfer-0.1.12 scipy-1.0.0 simplegeneric-0.8.1 six-1.11.0 smart-open-1.5.6 snowballstemmer-1.2.1 sphinx-1.7.0 sphinxcontrib-websupport-1.0.1 terminado-0.8.1 testpath-0.3.1 tornado-4.5.3 traitlets-4.3.2 urllib3-1.22 wcwidth-0.1.7 webencodings-0.5.1 widgetsnbextension-3.1.3 wordcloud-1.3.1
+ ./setup.py sdist bdist_wheel
running sdist
running egg_info
writing top-level names to dariah_topics.egg-info/top_level.txt
writing dariah_topics.egg-info/PKG-INFO
writing dependency_links to dariah_topics.egg-info/dependency_links.txt
writing requirements to dariah_topics.egg-info/requires.txt
reading manifest file 'dariah_topics.egg-info/SOURCES.txt'
writing manifest file 'dariah_topics.egg-info/SOURCES.txt'
running check
warning: check: missing required meta-data: url
creating dariah_topics-0.5.0.dev1
creating dariah_topics-0.5.0.dev1/dariah_topics
creating dariah_topics-0.5.0.dev1/dariah_topics.egg-info
creating dariah_topics-0.5.0.dev1/test
copying files to dariah_topics-0.5.0.dev1...
copying README.md -> dariah_topics-0.5.0.dev1
copying setup.cfg -> dariah_topics-0.5.0.dev1
copying setup.py -> dariah_topics-0.5.0.dev1
copying dariah_topics/__init__.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/doc_meta_list.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/doclist.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/evaluation.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/mallet.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/meta.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/postprocessing.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/preprocessing.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics/visualization.py -> dariah_topics-0.5.0.dev1/dariah_topics
copying dariah_topics.egg-info/PKG-INFO -> dariah_topics-0.5.0.dev1/dariah_topics.egg-info
copying dariah_topics.egg-info/SOURCES.txt -> dariah_topics-0.5.0.dev1/dariah_topics.egg-info
copying dariah_topics.egg-info/dependency_links.txt -> dariah_topics-0.5.0.dev1/dariah_topics.egg-info
copying dariah_topics.egg-info/requires.txt -> dariah_topics-0.5.0.dev1/dariah_topics.egg-info
copying dariah_topics.egg-info/top_level.txt -> dariah_topics-0.5.0.dev1/dariah_topics.egg-info
copying test/test_fuzzy_segmenting.py -> dariah_topics-0.5.0.dev1/test
Writing dariah_topics-0.5.0.dev1/setup.cfg
Creating tar archive
removing 'dariah_topics-0.5.0.dev1' (and everything under it)
running bdist_wheel
running build
running build_py
copying dariah_topics/visualization.py -> build/lib/dariah_topics
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/postprocessing.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/preprocessing.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/visualization.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/doc_meta_list.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/doclist.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/meta.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/__init__.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/mallet.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/evaluation.py -> build/bdist.linux-x86_64/wheel/dariah_topics
running install_egg_info
Copying dariah_topics.egg-info to build/bdist.linux-x86_64/wheel/dariah_topics-0.5.0.dev1-py3.5.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/dariah_topics-0.5.0.dev1.dist-info/WHEEL
creating '/mnt/data/jenkins/workspace/DARIAH-Topics/dist/dariah_topics-0.5.0.dev1-py3-none-any.whl' and adding '.' to it
adding 'dariah_topics/__init__.py'
adding 'dariah_topics/doc_meta_list.py'
adding 'dariah_topics/doclist.py'
adding 'dariah_topics/evaluation.py'
adding 'dariah_topics/mallet.py'
adding 'dariah_topics/meta.py'
adding 'dariah_topics/postprocessing.py'
adding 'dariah_topics/preprocessing.py'
adding 'dariah_topics/visualization.py'
adding 'dariah_topics-0.5.0.dev1.dist-info/DESCRIPTION.rst'
adding 'dariah_topics-0.5.0.dev1.dist-info/metadata.json'
adding 'dariah_topics-0.5.0.dev1.dist-info/top_level.txt'
adding 'dariah_topics-0.5.0.dev1.dist-info/WHEEL'
adding 'dariah_topics-0.5.0.dev1.dist-info/METADATA'
adding 'dariah_topics-0.5.0.dev1.dist-info/RECORD'
+ pytest --nbsmoke-run
============================= test session starts ==============================
platform linux -- Python 3.5.3, pytest-3.4.0, py-1.5.2, pluggy-0.6.0
rootdir: /mnt/data/jenkins/workspace/DARIAH-Topics, inifile: setup.cfg
plugins: nbsmoke-0.1.6, cov-2.5.1
collected 59 items
IntroducingGensim.ipynb . [ 1%]
IntroducingLda.ipynb . [ 3%]
IntroducingMallet.ipynb . [ 5%]
Visualizations.ipynb . [ 6%]
dariah_topics/mallet.py ...... [ 16%]
dariah_topics/postprocessing.py ........... [ 35%]
dariah_topics/preprocessing.py ........................... [ 81%]
dariah_topics/visualization.py .. [ 84%]
test/test_fuzzy_segmenting.py ......... [100%]
--- generated xml file: /mnt/data/jenkins/workspace/DARIAH-Topics/tests.xml ----
----------- coverage: platform linux, python 3.5.3-final-0 -----------
Coverage HTML written to dir htmlcov
Coverage XML written to file coverage.xml
=============================== warnings summary ===============================
dariah_topics/postprocessing.py::dariah_topics.postprocessing.doc2bow
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/postprocessing.py::dariah_topics.postprocessing.save_document_term_matrix
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing._create_large_corpus_model
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing._hapax_legomena_large_corpus_model
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing._remove_features_from_large_corpus_model
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing._stopwords_large_corpus_model
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing.create_document_term_matrix
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing.find_hapax_legomena
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing.find_stopwords
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
dariah_topics/preprocessing.py::dariah_topics.preprocessing.remove_features
/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:736: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))
-- Docs: http://doc.pytest.org/en/latest/warnings.html
=================== 59 passed, 10 warnings in 183.42 seconds ===================
+ ./setup.py build_sphinx -a
running build_sphinx
Running Sphinx v1.7.0
loading pickled environment... done
[autosummary] generating autosummary for: IntroducingGensim.ipynb, IntroducingLda.ipynb, IntroducingMallet.ipynb, README.md, Visualizations.ipynb, docs/CONTRIBUTING.md, docs/gen/dariah_topics.doclist.rst, docs/gen/dariah_topics.evaluation.rst, docs/gen/dariah_topics.mallet.rst, docs/gen/dariah_topics.meta.rst, docs/gen/dariah_topics.preprocessing.rst, docs/gen/dariah_topics.rst, docs/gen/dariah_topics.visualization.rst, docs/gen/modules.rst, index.rst
loading intersphinx inventory from https://radimrehurek.com/gensim/objects.inv...
loading intersphinx inventory from http://pandas.pydata.org/pandas-docs/stable/objects.inv...
loading intersphinx inventory from https://matplotlib.org/objects.inv...
loading intersphinx inventory from http://docs.python.org/3/objects.inv...
intersphinx inventory has moved: http://docs.python.org/3/objects.inv -> https://docs.python.org/3/objects.inv
building [mo]: all of 0 po files
building [html]: all source files
updating environment: 0 added, 6 changed, 0 removed
reading sources... [ 16%] README
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/importlib/_bootstrap.py:222: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88
return f(*args, **kwds)
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/importlib/_bootstrap.py:222: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88
return f(*args, **kwds)
Exception occurred:
File "/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/docutils/transforms/universal.py", line 263, in apply
lc_smartquotes = self.document.settings.smartquotes_locales
AttributeError: 'Values' object has no attribute 'smartquotes_locales'
The full traceback has been saved in /tmp/sphinx-err-xtn91l_f.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!
+ echo WARNING: Building the documentation failed
WARNING: Building the documentation failed
[DocLinks] Copying Documentation to 1 ...
Recording test results
[Cobertura] Publishing Cobertura coverage report...
[Cobertura] Publishing Cobertura coverage results...
[Cobertura] Cobertura coverage report found.
[Set GitHub commit status (universal)] SUCCESS on repos [GHRepository@494f02b6[description=A Python library for Topic Modeling.,homepage=,name=Topics,license=<null>,fork=true,size=38768,milestones={},language=Jupyter Notebook,commits={},responseHeaderFields={null=[HTTP/1.1 200 OK], Access-Control-Allow-Origin=[*], Access-Control-Expose-Headers=[ETag, Link, Retry-After, X-GitHub-OTP, X-RateLimit-Limit, X-RateLimit-Remaining, X-RateLimit-Reset, X-OAuth-Scopes, X-Accepted-OAuth-Scopes, X-Poll-Interval], Cache-Control=[private, max-age=60, s-maxage=60], Content-Encoding=[gzip], Content-Security-Policy=[default-src 'none'], Content-Type=[application/json; charset=utf-8], Date=[Tue, 13 Feb 2018 08:42:08 GMT], ETag=[W/"612dfc99ec5b96704d5611d39563d62b"], Last-Modified=[Fri, 02 Feb 2018 01:31:32 GMT], OkHttp-Received-Millis=[1518511328604], OkHttp-Response-Source=[CONDITIONAL_CACHE 200], OkHttp-Selected-Protocol=[http/1.1], OkHttp-Sent-Millis=[1518511328412], Server=[GitHub.com], Status=[200 OK], Strict-Transport-Security=[max-age=31536000; includeSubdomains; preload], Transfer-Encoding=[chunked], Vary=[Accept, Authorization, Cookie, X-GitHub-OTP], X-Accepted-OAuth-Scopes=[repo], X-Content-Type-Options=[nosniff], X-Frame-Options=[deny], X-GitHub-Media-Type=[github.v3; format=json], X-GitHub-Request-Id=[9441:7EAC:2CD72D:4C94B5:5A82A4E0], X-OAuth-Scopes=[admin:repo_hook, repo, repo:status], X-RateLimit-Limit=[5000], X-RateLimit-Remaining=[4999], X-RateLimit-Reset=[1518514928], X-Runtime-rack=[0.094359], X-XSS-Protection=[1; mode=block]},url=https://api.github.com/repos/DARIAH-DE/Topics,id=69341969]] (sha:04b857d) with context:DARIAH-Topics
Setting commit status on GitHub for https://github.com/DARIAH-DE/Topics/commit/04b857dce07574e2b2ed31d85669b3f3af59bd3f
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
[ci-game] evaluating rule: Build result
[ci-game] scored: 1.0
[ci-game] evaluating rule: Increased number of passed tests
[ci-game] evaluating rule: Decreased number of passed tests
[ci-game] evaluating rule: Increased number of failed tests
[ci-game] evaluating rule: Decreased number of failed tests
[ci-game] evaluating rule: Increased number of skipped tests
[ci-game] evaluating rule: Decreased number of skipped tests
[ci-game] evaluating rule: Open HIGH priority tasks
[ci-game] evaluating rule: Open NORMAL priority tasks
[ci-game] evaluating rule: Open LOW priority tasks
[ci-game] evaluating rule: Changed number of compiler warnings
Finished: SUCCESS
![[Jenkins]](/ci/static/5d841056/images/svgs/logo.svg){kind=logo}
