Console Output
Started by GitHub push by thvitt
Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/pydelta-next
Cloning the remote Git repository
Cloning repository https://github.com/cophi-wue/pydelta
> git init /mnt/data/jenkins/workspace/pydelta-next # timeout=10
Fetching upstream changes from https://github.com/cophi-wue/pydelta
> git --version # timeout=10
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/*
> git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10
Fetching upstream changes from https://github.com/cophi-wue/pydelta
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/*
> git rev-parse refs/remotes/origin/next^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/next^{commit} # timeout=10
Checking out Revision 917ca95010e15f47d7f1d1b6e00263b448d9ac20 (refs/remotes/origin/next)
> git config core.sparsecheckout # timeout=10
> git checkout -f 917ca95010e15f47d7f1d1b6e00263b448d9ac20
> git rev-list 20f3900a82576efafaa961f20032f2a7c0b0a6f6 # timeout=10
No emails were triggered.
[pydelta-next] $ /bin/sh -xe /tmp/shiningpanda3267693508125716688.sh
+ pip install -U pip
Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
+ pip install -U numpy scipy Cython
Requirement already up-to-date: numpy in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
Requirement already up-to-date: scipy in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
Requirement already up-to-date: Cython in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
+ pip install -U -r requirements.txt
Obtaining file:///mnt/data/jenkins/workspace/pydelta-next (from -r requirements.txt (line 1))
Requirement already up-to-date: Cython in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 3))
Collecting scikit_learn from git+https://github.com/Kornel/scikit-learn@tk-kmedoids#egg=scikit_learn (from -r requirements.txt (line 5))
Cloning https://github.com/Kornel/scikit-learn (to tk-kmedoids) to /tmp/pip-build-u4q37vlz/scikit-learn
Requirement already up-to-date: nose in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 7))
Requirement already up-to-date: nose-progressive in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 8))
Requirement already up-to-date: nosexcover in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 9))
Collecting Sphinx (from -r requirements.txt (line 10))
Downloading Sphinx-1.6.2-py2.py3-none-any.whl (1.9MB)
Collecting ipykernel (from -r requirements.txt (line 11))
Using cached ipykernel-4.6.1-py3-none-any.whl
Requirement already up-to-date: nbsphinx in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 12))
Requirement already up-to-date: scipy>=0.14.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Collecting matplotlib>=1.3.1 (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Downloading matplotlib-2.0.2-cp35-cp35m-manylinux1_x86_64.whl (14.6MB)
Requirement already up-to-date: numpy>=1.8.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Collecting pandas>=0.13.1 (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Downloading pandas-0.20.2-cp35-cp35m-manylinux1_x86_64.whl (24.0MB)
Collecting regex (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Requirement already up-to-date: blessings<2.0,>=1.3 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nose-progressive->-r requirements.txt (line 8))
Collecting coverage>=3.4 (from nosexcover->-r requirements.txt (line 9))
Using cached coverage-4.4.1-cp35-cp35m-manylinux1_x86_64.whl
Requirement already up-to-date: six>=1.5 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Requirement already up-to-date: Pygments>=2.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Requirement already up-to-date: Jinja2>=2.3 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Collecting sphinxcontrib-websupport (from Sphinx->-r requirements.txt (line 10))
Downloading sphinxcontrib_websupport-1.0.1-py2.py3-none-any.whl
Requirement already up-to-date: docutils>=0.11 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Collecting setuptools (from Sphinx->-r requirements.txt (line 10))
Downloading setuptools-36.0.1-py2.py3-none-any.whl (476kB)
Collecting requests>=2.0.0 (from Sphinx->-r requirements.txt (line 10))
Using cached requests-2.17.3-py2.py3-none-any.whl
Requirement already up-to-date: imagesize in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Requirement already up-to-date: babel!=2.0,>=1.3 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Requirement already up-to-date: snowballstemmer>=1.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Requirement already up-to-date: alabaster<0.8,>=0.7 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 10))
Collecting tornado>=4.0 (from ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: jupyter-client in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipykernel->-r requirements.txt (line 11))
Collecting ipython>=4.0.0 (from ipykernel->-r requirements.txt (line 11))
Downloading ipython-6.1.0-py3-none-any.whl (741kB)
Requirement already up-to-date: traitlets>=4.1.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipykernel->-r requirements.txt (line 11))
Collecting nbconvert (from nbsphinx->-r requirements.txt (line 12))
Using cached nbconvert-5.2.1-py2.py3-none-any.whl
Requirement already up-to-date: nbformat in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbsphinx->-r requirements.txt (line 12))
Requirement already up-to-date: cycler>=0.10 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Requirement already up-to-date: python-dateutil in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Requirement already up-to-date: pytz in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Requirement already up-to-date: pyparsing!=2.0.0,!=2.0.4,!=2.1.2,!=2.1.6,>=1.5.6 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Requirement already up-to-date: MarkupSafe>=0.23 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Jinja2>=2.3->Sphinx->-r requirements.txt (line 10))
Collecting certifi>=2017.4.17 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 10))
Using cached certifi-2017.4.17-py2.py3-none-any.whl
Collecting idna<2.6,>=2.5 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 10))
Using cached idna-2.5-py2.py3-none-any.whl
Collecting urllib3<1.22,>=1.21.1 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 10))
Using cached urllib3-1.21.1-py2.py3-none-any.whl
Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 10))
Using cached chardet-3.0.3-py2.py3-none-any.whl
Requirement already up-to-date: pyzmq>=13 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from jupyter-client->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: jupyter-core in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from jupyter-client->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: pickleshare in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: prompt-toolkit<2.0.0,>=1.0.4 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Collecting jedi>=0.10 (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Using cached jedi-0.10.2-py2.py3-none-any.whl
Requirement already up-to-date: simplegeneric>0.8 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: decorator in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: pexpect; sys_platform != "win32" in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: ipython-genutils in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from traitlets>=4.1.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: bleach in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbconvert->nbsphinx->-r requirements.txt (line 12))
Requirement already up-to-date: pandocfilters>=1.4.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbconvert->nbsphinx->-r requirements.txt (line 12))
Collecting testpath (from nbconvert->nbsphinx->-r requirements.txt (line 12))
Using cached testpath-0.3.1-py2.py3-none-any.whl
Requirement already up-to-date: mistune!=0.6 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbconvert->nbsphinx->-r requirements.txt (line 12))
Requirement already up-to-date: entrypoints>=0.2.2 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbconvert->nbsphinx->-r requirements.txt (line 12))
Requirement already up-to-date: jsonschema!=2.5.0,>=2.4 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbformat->nbsphinx->-r requirements.txt (line 12))
Requirement already up-to-date: wcwidth in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from prompt-toolkit<2.0.0,>=1.0.4->ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: ptyprocess>=0.5 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from pexpect; sys_platform != "win32"->ipython>=4.0.0->ipykernel->-r requirements.txt (line 11))
Requirement already up-to-date: html5lib>=0.99999999 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from bleach->nbconvert->nbsphinx->-r requirements.txt (line 12))
Requirement already up-to-date: webencodings in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from html5lib>=0.99999999->bleach->nbconvert->nbsphinx->-r requirements.txt (line 12))
Installing collected packages: scikit-learn, sphinxcontrib-websupport, setuptools, certifi, idna, urllib3, chardet, requests, Sphinx, tornado, jedi, ipython, ipykernel, matplotlib, pandas, regex, delta, coverage, testpath, nbconvert
Found existing installation: scikit-learn 0.19.dev0
Uninstalling scikit-learn-0.19.dev0:
Successfully uninstalled scikit-learn-0.19.dev0
Running setup.py install for scikit-learn: started
Running setup.py install for scikit-learn: still running...
Running setup.py install for scikit-learn: finished with status 'done'
Found existing installation: setuptools 34.4.1
Uninstalling setuptools-34.4.1:
Successfully uninstalled setuptools-34.4.1
Found existing installation: requests 2.13.0
Uninstalling requests-2.13.0:
Successfully uninstalled requests-2.13.0
Found existing installation: Sphinx 1.5.5
Uninstalling Sphinx-1.5.5:
Successfully uninstalled Sphinx-1.5.5
Found existing installation: tornado 4.4.3
Uninstalling tornado-4.4.3:
Successfully uninstalled tornado-4.4.3
Found existing installation: ipython 5.3.0
Uninstalling ipython-5.3.0:
Successfully uninstalled ipython-5.3.0
Found existing installation: ipykernel 4.6.0
Uninstalling ipykernel-4.6.0:
Successfully uninstalled ipykernel-4.6.0
Found existing installation: matplotlib 2.0.0
Uninstalling matplotlib-2.0.0:
Successfully uninstalled matplotlib-2.0.0
Found existing installation: pandas 0.19.2
Uninstalling pandas-0.19.2:
Successfully uninstalled pandas-0.19.2
Found existing installation: regex 2017.4.5
Uninstalling regex-2017.4.5:
Successfully uninstalled regex-2017.4.5
Found existing installation: delta 2.0.0.dev1
Uninstalling delta-2.0.0.dev1:
Successfully uninstalled delta-2.0.0.dev1
Running setup.py develop for delta
Found existing installation: coverage 4.3.4
Uninstalling coverage-4.3.4:
Successfully uninstalled coverage-4.3.4
Found existing installation: testpath 0.3
Uninstalling testpath-0.3:
Successfully uninstalled testpath-0.3
Found existing installation: nbconvert 5.1.1
Uninstalling nbconvert-5.1.1:
Successfully uninstalled nbconvert-5.1.1
Successfully installed Sphinx-1.6.2 certifi-2017.4.17 chardet-3.0.3 coverage-4.4.1 delta idna-2.5 ipykernel-4.6.1 ipython-6.1.0 jedi-0.10.2 matplotlib-2.0.2 nbconvert-5.2.1 pandas-0.20.2 regex-2017.5.26 requests-2.17.3 scikit-learn-0.19.dev0 setuptools-36.0.1 sphinxcontrib-websupport-1.0.1 testpath-0.3.1 tornado-4.5.1 urllib3-1.21.1
+ ./setup.py sdist bdist
running sdist
running egg_info
writing top-level names to delta.egg-info/top_level.txt
writing dependency_links to delta.egg-info/dependency_links.txt
writing delta.egg-info/PKG-INFO
writing requirements to delta.egg-info/requires.txt
reading manifest file 'delta.egg-info/SOURCES.txt'
writing manifest file 'delta.egg-info/SOURCES.txt'
running check
warning: check: missing required meta-data: url
warning: check: missing meta-data: if 'author' supplied, 'author_email' must be supplied too
creating delta-2.0.0.dev1
creating delta-2.0.0.dev1/delta
creating delta-2.0.0.dev1/delta.egg-info
copying files to delta-2.0.0.dev1...
copying README.rst -> delta-2.0.0.dev1
copying setup.cfg -> delta-2.0.0.dev1
copying setup.py -> delta-2.0.0.dev1
copying delta/__init__.py -> delta-2.0.0.dev1/delta
copying delta/cluster.py -> delta-2.0.0.dev1/delta
copying delta/corpus.py -> delta-2.0.0.dev1/delta
copying delta/deltas.py -> delta-2.0.0.dev1/delta
copying delta/experiments.py -> delta-2.0.0.dev1/delta
copying delta/features.py -> delta-2.0.0.dev1/delta
copying delta/graphics.py -> delta-2.0.0.dev1/delta
copying delta/util.py -> delta-2.0.0.dev1/delta
copying delta.egg-info/PKG-INFO -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/SOURCES.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/dependency_links.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/requires.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/top_level.txt -> delta-2.0.0.dev1/delta.egg-info
Writing delta-2.0.0.dev1/setup.cfg
creating dist
Creating tar archive
removing 'delta-2.0.0.dev1' (and everything under it)
running bdist
running bdist_dumb
running build
running build_py
creating build
creating build/lib
creating build/lib/delta
copying delta/corpus.py -> build/lib/delta
copying delta/graphics.py -> build/lib/delta
copying delta/deltas.py -> build/lib/delta
copying delta/cluster.py -> build/lib/delta
copying delta/__init__.py -> build/lib/delta
copying delta/experiments.py -> build/lib/delta
copying delta/features.py -> build/lib/delta
copying delta/util.py -> build/lib/delta
installing to build/bdist.linux-x86_64/dumb
running install
running install_lib
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/dumb
creating build/bdist.linux-x86_64/dumb/mnt
creating build/bdist.linux-x86_64/dumb/mnt/data
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/corpus.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/graphics.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/deltas.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/cluster.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/__init__.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/experiments.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/features.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/util.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/corpus.py to corpus.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/graphics.py to graphics.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/deltas.py to deltas.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/cluster.py to cluster.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/__init__.py to __init__.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/experiments.py to experiments.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/features.py to features.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/util.py to util.cpython-35.pyc
running install_egg_info
Copying delta.egg-info to build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta-2.0.0.dev1-py3.5.egg-info
running install_scripts
Creating tar archive
removing 'build/bdist.linux-x86_64/dumb' (and everything under it)
+ ./setup.py build_sphinx
running build_sphinx
creating /mnt/data/jenkins/workspace/pydelta-next/build/sphinx
creating /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/doctrees
creating /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html
Running Sphinx v1.6.2
loading pickled environment... not yet created
loading intersphinx inventory from http://docs.python.org/objects.inv...
intersphinx inventory has moved: http://docs.python.org/objects.inv -> https://docs.python.org/2/objects.inv
loading intersphinx inventory from http://pandas.pydata.org/pandas-docs/stable/objects.inv...
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 9 source files that are out of date
updating environment: 9 added, 0 changed, 0 removed
reading sources... [ 11%] CustomizingPipeline
reading sources... [ 22%] GettingStarted
reading sources... [ 33%] README
reading sources... [ 44%] README-branch
reading sources... [ 55%] concept
reading sources... [ 66%] delta
reading sources... [ 77%] index
reading sources... [ 88%] modules
reading sources... [100%] refactoring-notes
/mnt/data/jenkins/workspace/pydelta-next/docs/CustomizingPipeline.ipynb:2364: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.html#delta.corpus.Corpus'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.html#corpus.Corpus.relative_frequencies'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.html#corpus.Corpus.get_mfw_table'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.html#deltas.DistanceMatrix'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.rst#cluster.Clustering'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.html#graph.Dendrogram'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.html#corpus.DocumentDescriber'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb.rst: WARNING: file not found: 'delta.rst#cluster.FlatClustering'
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:67: WARNING: Unknown interpreted text role "function".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.tokenize:3: WARNING: Unknown interpreted text role "param".
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.distance:8: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.iterate_distance:12: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/graphics.py:docstring of delta.graphics.Dendrogram:33: WARNING: Unknown interpreted text role "module".
/mnt/data/jenkins/workspace/pydelta-next/docs/delta.rst:59: WARNING: __all__ should be a list of strings, not [<class 'delta.corpus.Corpus'>, <class 'delta.corpus.FeatureGenerator'>, regex.Regex('\\p{L}+', flags=regex.V0), regex.Regex("\\b(\\p{L}[\\p{L}'’]*?|[\\p{L}'’]*?\\p{L})\\b", flags=regex.V0 | regex.W), <delta.deltas._FunctionRegistry object at 0x7f3ebccd6048>, <class 'delta.deltas.Normalization'>, <function normalization at 0x7f3ebc6559d8>, <class 'delta.deltas.DeltaFunction'>, <class 'delta.deltas.PDistDeltaFunction'>, <class 'delta.deltas.MetricDeltaFunction'>, <class 'delta.deltas.CompositeDeltaFunction'>, <class 'delta.cluster.Clustering'>, <class 'delta.cluster.FlatClustering'>, <function get_rfe_features at 0x7f3eb365cd08>, <class 'delta.graphics.Dendrogram'>, <class 'delta.cluster.KMedoidsClustering'>] (in module delta) -- ignoring __all__
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:9: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:12: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... done
checking consistency... /mnt/data/jenkins/workspace/pydelta-next/docs/README-branch.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/modules.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 11%] CustomizingPipeline
writing output... [ 22%] GettingStarted
writing output... [ 33%] README
writing output... [ 44%] README-branch
writing output... [ 55%] concept
writing output... [ 66%] delta
writing output... [ 77%] index
writing output... [ 88%] modules
writing output... [100%] refactoring-notes
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:285: WARNING: 'any' reference target not found: the :math:`n
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:31: WARNING: 'any' reference target not found: sort
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:32: WARNING: 'any' reference target not found: reparse_column
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:33: WARNING: 'any' reference target not found: relativize
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:36: WARNING: 'any' reference target not found: normalize
/mnt/data/jenkins/workspace/pydelta-next/docs/delta.rst:16: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.postprocess_tokens:4: WARNING: 'any' reference target not found: lower_case
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.count_tokens:1: WARNING: 'any' reference target not found: lines
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.process_file:3: WARNING: 'any' reference target not found: filename
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.new_data:1: WARNING: 'any' reference target not found: DataFrame
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.get_mfw_table:: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.top_n:: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction:: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.MetricDeltaFunction:18: WARNING: 'any' reference target not found: fix_symmetry
generating indices... genindex py-modindex
highlighting module code... [ 20%] delta.corpus
highlighting module code... [ 40%] delta.cluster
highlighting module code... [ 60%] delta.util
highlighting module code... [ 80%] delta.deltas
highlighting module code... [100%] delta.graphics
writing additional pages... search
copying images... [ 33%] ../build/sphinx/doctrees/nbsphinx/CustomizingPipeline_22_0.png
copying images... [ 66%] ../build/sphinx/doctrees/nbsphinx/CustomizingPipeline_11_0.png
copying images... [100%] ../build/sphinx/doctrees/nbsphinx/GettingStarted_22_0.png
copying static files... /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/sphinx/application.py:445: RemovedInSphinx17Warning: app.status_iterator() is now deprecated. Use sphinx.util.status_iterator() instead.
RemovedInSphinx17Warning)
WARNING: html_static_path entry '/mnt/data/jenkins/workspace/pydelta-next/docs/_static' does not exist
done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 37 warnings.
+ nosetests
............/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/pandas/io/parsers.py:405: ParserWarning: Conflicting values for 'delimiter': ' ' was provided, but the dialect specifies ','. Using the dialect-specified value.
parser = TextFileReader(filepath_or_buffer, **kwds)
......
Name Stmts Miss Cover
------------------------------------------
delta/__init__.py 16 2 88%
delta/cluster.py 116 22 81%
delta/corpus.py 187 67 64%
delta/deltas.py 363 136 63%
delta/experiments.py 2 0 100%
delta/features.py 19 14 26%
delta/graphics.py 85 66 22%
delta/util.py 108 24 78%
------------------------------------------
TOTAL 896 331 63%
----------------------------------------------------------------------
Ran 18 tests in 7.437s
OK
[htmlpublisher] Archiving HTML reports...
[htmlpublisher] Archiving at PROJECT level /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html to /mnt/data/jenkins/jobs/pydelta-next/htmlreports/Documentation
Recording test results
[Cobertura] Publishing Cobertura coverage report...
Publishing Cobertura coverage results...
Cobertura coverage report found.
[Set GitHub commit status (universal)] SUCCESS on repos [GHRepository@75f1e716[description=an experimental implementation of Burrow's delta in Python 3,homepage=http://dev.digital-humanities.de/ci/job/pydelta-next/Documentation/index.html,name=pydelta,license=<null>,fork=true,size=2966,milestones={},language=Jupyter Notebook,commits={},url=https://api.github.com/repos/cophi-wue/pydelta,id=84633971]] (sha:917ca95) with context:pydelta-next
Setting commit status on GitHub for https://github.com/cophi-wue/pydelta/commit/917ca95010e15f47d7f1d1b6e00263b448d9ac20
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
No emails were triggered.
Finished: SUCCESS
![[Jenkins]](/ci/static/5d841056/images/svgs/logo.svg){kind=logo}
