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Console Output

Started by user Thorsten Vitt
Running as SYSTEM
Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/pydelta-next
The recommended git tool is: NONE
using credential Github
 > /usr/bin/git rev-parse --resolve-git-dir /mnt/data/jenkins/workspace/pydelta-next/.git # timeout=10
Fetching changes from the remote Git repository
 > /usr/bin/git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10
Fetching upstream changes from https://github.com/cophi-wue/pydelta
 > /usr/bin/git --version # timeout=10
 > git --version # 'git version 2.11.0'
using GIT_ASKPASS to set credentials 
 > /usr/bin/git fetch --tags --progress -- https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/* # timeout=10
 > /usr/bin/git rev-parse refs/remotes/origin/next^{commit} # timeout=10
Checking out Revision 35b061403021005713515a9040488e76886b3b48 (refs/remotes/origin/next)
 > /usr/bin/git config core.sparsecheckout # timeout=10
 > /usr/bin/git checkout -f 35b061403021005713515a9040488e76886b3b48 # timeout=10
Commit message: "fix(corpus): register corpus attributes."
 > /usr/bin/git rev-list --no-walk 35b061403021005713515a9040488e76886b3b48 # timeout=10
No emails were triggered.
$ bash -c "[ -d \$HOME/.pyenv ]"
$ bash -c "cd /mnt/data/jenkins/workspace/pydelta-next && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true"
$ bash -c "mkdir \$HOME/.pyenv.lock"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv versions --bare"
Updating pyenv...
$ bash -c "cd \$HOME/.pyenv && git checkout master && git pull"
Already on 'master'
Your branch is up-to-date with 'origin/master'.
From https://github.com/yyuu/pyenv
   20df0642..0688b17c  master     -> origin/master
 * [new tag]           v2.0.3     -> v2.0.3
 * [new tag]           v2.0.4     -> v2.0.4
 * [new tag]           v2.0.5     -> v2.0.5
 * [new tag]           v2.0.6     -> v2.0.6
 * [new tag]           v2.0.7     -> v2.0.7
Updating 20df0642..0688b17c
Fast-forward
 .github/workflows/pyenv_tests.yml                  |  35 +++
 .github/workflows/ubuntu_tests.yml                 |   1 +
 CHANGELOG.md                                       |  40 +++
 COMMANDS.md                                        |  69 ++++-
 README.md                                          | 308 ++++++++++++---------
 libexec/pyenv                                      |  10 +-
 libexec/pyenv---version                            |   2 +-
 libexec/pyenv-help                                 |   5 +-
 libexec/pyenv-init                                 |  71 +----
 libexec/pyenv-prefix                               |   4 +-
 pyenv.1 => man/man1/pyenv.1                        |   0
 plugins/python-build/bin/pyenv-uninstall           |   2 +-
 plugins/python-build/bin/python-build              | 134 +++++++--
 plugins/python-build/scripts/add_miniconda.py      |  34 ++-
 plugins/python-build/share/python-build/2.6.0      |   4 +
 plugins/python-build/share/python-build/2.6.1      |   4 +
 plugins/python-build/share/python-build/2.6.2      |   4 +
 plugins/python-build/share/python-build/2.6.3      |   4 +
 plugins/python-build/share/python-build/2.6.4      |   4 +
 plugins/python-build/share/python-build/2.6.5      |   4 +
 .../share/python-build/{3.10.0b3 => 3.10.0rc2}     |   4 +-
 plugins/python-build/share/python-build/3.6.14     |   9 +
 plugins/python-build/share/python-build/3.6.15     |  10 +
 plugins/python-build/share/python-build/3.7.11     |  10 +
 plugins/python-build/share/python-build/3.7.12     |  10 +
 plugins/python-build/share/python-build/3.8-dev    |   2 +-
 plugins/python-build/share/python-build/3.8.10     |   4 +-
 plugins/python-build/share/python-build/3.8.11     |  10 +
 plugins/python-build/share/python-build/3.8.12     |  10 +
 plugins/python-build/share/python-build/3.9-dev    |   2 +-
 plugins/python-build/share/python-build/3.9.1      |   4 +-
 plugins/python-build/share/python-build/3.9.2      |   4 +-
 plugins/python-build/share/python-build/3.9.3      |  10 -
 plugins/python-build/share/python-build/3.9.4      |   4 +-
 plugins/python-build/share/python-build/3.9.5      |   4 +-
 plugins/python-build/share/python-build/3.9.6      |  10 +
 plugins/python-build/share/python-build/3.9.7      |  10 +
 .../share/python-build/graalpython-21.2.0          |  48 ++++
 plugins/python-build/share/python-build/mambaforge |  25 ++
 .../share/python-build/mambaforge-pypy3            |  22 ++
 .../share/python-build/miniconda2-2.7-4.8.3        |  19 ++
 .../share/python-build/miniconda3-3.7-4.10.3       |  19 ++
 .../share/python-build/miniconda3-3.8-4.10.3       |  19 ++
 .../share/python-build/miniconda3-3.9-4.10.3       |  19 ++
 .../share/python-build/miniforge-pypy3             |  23 ++
 plugins/python-build/share/python-build/miniforge3 |  25 ++
 .../2.6.0/Python-2.6/000_patch-setup.py.diff       |  71 +++++
 .../patches/2.6.0/Python-2.6/002_readline63.patch  |  61 ++++
 .../patches/2.6.0/Python-2.6/003_tk86.patch        |  12 +
 .../2.6.0/Python-2.6/010_ssl_no_ssl2_no_ssl3.patch |  95 +++++++
 .../2.6.1/Python-2.6.1/000_patch-setup.py.diff     |  71 +++++
 .../2.6.1/Python-2.6.1/002_readline63.patch        |  61 ++++
 .../patches/2.6.1/Python-2.6.1/003_tk86.patch      |  12 +
 .../Python-2.6.1/010_ssl_no_ssl2_no_ssl3.patch     |  95 +++++++
 .../2.6.2/Python-2.6.2/000_patch-setup.py.diff     |  71 +++++
 .../2.6.2/Python-2.6.2/002_readline63.patch        |  61 ++++
 .../patches/2.6.2/Python-2.6.2/003_tk86.patch      |  12 +
 .../Python-2.6.2/010_ssl_no_ssl2_no_ssl3.patch     |  95 +++++++
 .../2.6.3/Python-2.6.3/000_patch-setup.py.diff     |  71 +++++
 .../2.6.3/Python-2.6.3/002_readline63.patch        |  61 ++++
 .../patches/2.6.3/Python-2.6.3/003_tk86.patch      |  12 +
 .../Python-2.6.3/010_ssl_no_ssl2_no_ssl3.patch     |  95 +++++++
 .../2.6.4/Python-2.6.4/000_patch-setup.py.diff     |  71 +++++
 .../2.6.4/Python-2.6.4/002_readline63.patch        |  61 ++++
 .../patches/2.6.4/Python-2.6.4/003_tk86.patch      |  12 +
 .../Python-2.6.4/010_ssl_no_ssl2_no_ssl3.patch     |  95 +++++++
 .../2.6.5/Python-2.6.5/000_patch-setup.py.diff     |  71 +++++
 .../2.6.5/Python-2.6.5/002_readline63.patch        |  61 ++++
 .../patches/2.6.5/Python-2.6.5/003_tk86.patch      |  12 +
 .../Python-2.6.5/010_ssl_no_ssl2_no_ssl3.patch     |  95 +++++++
 .../2.6.6/Python-2.6.6/000_patch-setup.py.diff     |  18 +-
 .../2.6.7/Python-2.6.7/000_patch-setup.py.diff     |  18 +-
 .../2.6.8/Python-2.6.8/000_patch-setup.py.diff     |  18 +-
 .../2.6.9/Python-2.6.9/000_patch-setup.py.diff     |  18 +-
 .../0001-Detect-arm64-in-configure.patch           |  41 +++
 ...tkinter-use-of-Tck-Tk-in-Library-Framewor.patch | 237 ++++++++++++++++
 .../0003-Support-arm64-in-Mac-Tools-pythonw.patch  |  34 +++
 ...Use-system-libffi-for-Mac-OS-10.15-and-up.patch |  85 ++++++
 ...se-the-correct-ABI-for-variadic-functions.patch | 221 +++++++++++++++
 ...e-libffi-for-ffi_closure_alloc-and-ffi_pr.patch | 108 ++++++++
 .../0007-Remove-QuickTime-from-link-args.patch     |  40 +++
 .../3.1.0/Python-3.1/000_patch-setup.py.diff       |  10 +
 .../3.1.1/Python-3.1.1/000_patch-setup.py.diff     |  10 +
 .../3.1.2/Python-3.1.2/000_patch-setup.py.diff     |  10 +
 .../3.1.3/Python-3.1.3/000_patch-setup.py.diff     |  11 +-
 .../3.1.4/Python-3.1.4/000_patch-setup.py.diff     |  12 +
 .../3.1.5/Python-3.1.5/000_patch-setup.py.diff     |  12 +
 plugins/python-build/share/python-build/pyston-2.2 |   2 +-
 plugins/python-build/share/python-build/pyston-2.3 |  19 ++
 .../python-build/share/python-build/pyston-2.3.1   |  19 ++
 plugins/python-build/test/build.bats               |  76 ++++-
 plugins/python-build/test/compiler.bats            |   8 +-
 plugins/python-build/test/pyenv_ext.bats           |  26 +-
 plugins/python-build/test/stubs/stub               |  40 ++-
 plugins/python-build/test/test_helper.bash         |   1 +
 plugins/python-build/test/version.bats             |   3 +-
 pyenv.d/rehash/conda.bash                          |  25 +-
 test/exec.bats                                     |   2 +-
 test/init.bats                                     |   9 +-
 test/prefix.bats                                   |  11 +-
 test/test_helper.bash                              |  38 +--
 test/versions.bats                                 |   2 +-
 102 files changed, 3354 insertions(+), 339 deletions(-)
 create mode 100644 .github/workflows/pyenv_tests.yml
 rename pyenv.1 => man/man1/pyenv.1 (100%)
 create mode 100644 plugins/python-build/share/python-build/2.6.0
 create mode 100644 plugins/python-build/share/python-build/2.6.1
 create mode 100644 plugins/python-build/share/python-build/2.6.2
 create mode 100644 plugins/python-build/share/python-build/2.6.3
 create mode 100644 plugins/python-build/share/python-build/2.6.4
 create mode 100644 plugins/python-build/share/python-build/2.6.5
 rename plugins/python-build/share/python-build/{3.10.0b3 => 3.10.0rc2} (53%)
 create mode 100644 plugins/python-build/share/python-build/3.6.14
 create mode 100644 plugins/python-build/share/python-build/3.6.15
 create mode 100644 plugins/python-build/share/python-build/3.7.11
 create mode 100644 plugins/python-build/share/python-build/3.7.12
 create mode 100644 plugins/python-build/share/python-build/3.8.11
 create mode 100644 plugins/python-build/share/python-build/3.8.12
 delete mode 100644 plugins/python-build/share/python-build/3.9.3
 create mode 100644 plugins/python-build/share/python-build/3.9.6
 create mode 100644 plugins/python-build/share/python-build/3.9.7
 create mode 100644 plugins/python-build/share/python-build/graalpython-21.2.0
 create mode 100644 plugins/python-build/share/python-build/mambaforge
 create mode 100644 plugins/python-build/share/python-build/mambaforge-pypy3
 create mode 100644 plugins/python-build/share/python-build/miniconda2-2.7-4.8.3
 create mode 100644 plugins/python-build/share/python-build/miniconda3-3.7-4.10.3
 create mode 100644 plugins/python-build/share/python-build/miniconda3-3.8-4.10.3
 create mode 100644 plugins/python-build/share/python-build/miniconda3-3.9-4.10.3
 create mode 100644 plugins/python-build/share/python-build/miniforge-pypy3
 create mode 100644 plugins/python-build/share/python-build/miniforge3
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.0/Python-2.6/000_patch-setup.py.diff
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.0/Python-2.6/002_readline63.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.0/Python-2.6/003_tk86.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.0/Python-2.6/010_ssl_no_ssl2_no_ssl3.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.1/Python-2.6.1/000_patch-setup.py.diff
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.1/Python-2.6.1/002_readline63.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.1/Python-2.6.1/003_tk86.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.1/Python-2.6.1/010_ssl_no_ssl2_no_ssl3.patch
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 create mode 100644 plugins/python-build/share/python-build/patches/2.6.2/Python-2.6.2/003_tk86.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.2/Python-2.6.2/010_ssl_no_ssl2_no_ssl3.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.3/Python-2.6.3/000_patch-setup.py.diff
 create mode 100644 plugins/python-build/share/python-build/patches/2.6.3/Python-2.6.3/002_readline63.patch
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 create mode 100644 plugins/python-build/share/python-build/patches/2.6.4/Python-2.6.4/000_patch-setup.py.diff
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 create mode 100644 plugins/python-build/share/python-build/patches/2.7.18/Python-2.7.18/0001-Detect-arm64-in-configure.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.7.18/Python-2.7.18/0002-Fix-macOS-_tkinter-use-of-Tck-Tk-in-Library-Framewor.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.7.18/Python-2.7.18/0003-Support-arm64-in-Mac-Tools-pythonw.patch
 create mode 100644 plugins/python-build/share/python-build/patches/2.7.18/Python-2.7.18/0004-Use-system-libffi-for-Mac-OS-10.15-and-up.patch
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 create mode 100644 plugins/python-build/share/python-build/patches/2.7.18/Python-2.7.18/0007-Remove-QuickTime-from-link-args.patch
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 create mode 100644 plugins/python-build/share/python-build/pyston-2.3
 create mode 100644 plugins/python-build/share/python-build/pyston-2.3.1
Updated pyenv.
Installing miniconda3-latest...
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv install miniconda3-latest"
Downloading Miniconda3-latest-Linux-x86_64.sh...
-> https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
Installing Miniconda3-latest-Linux-x86_64...
Collecting package metadata (current_repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /mnt/data/jenkins/.pyenv/versions/miniconda3-latest

  added / updated specs:
    - conda=4.10.3
    - pip


The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    openssl-1.1.1l             |       h7f8727e_0         2.5 MB
    pip-21.2.4                 |   py37h06a4308_0         1.8 MB
    ------------------------------------------------------------
                                           Total:         4.3 MB

The following packages will be UPDATED:

  openssl                                 1.1.1k-h27cfd23_0 --> 1.1.1l-h7f8727e_0
  pip                                 21.1.3-py39h06a4308_0 --> 21.2.4-py37h06a4308_0



Downloading and Extracting Packages

pip-21.2.4           | 1.8 MB    |            |   0% 
pip-21.2.4           | 1.8 MB    | ########## | 100% 
pip-21.2.4           | 1.8 MB    | ########## | 100% 

openssl-1.1.1l       | 2.5 MB    |            |   0% 
openssl-1.1.1l       | 2.5 MB    | ########## | 100% 
openssl-1.1.1l       | 2.5 MB    | ########## | 100% 
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Installed Miniconda3-latest-Linux-x86_64 to /mnt/data/jenkins/.pyenv/versions/miniconda3-latest

Installed miniconda3-latest.
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv exec pip list"
Installing poetry...
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv exec pip install poetry"
Collecting poetry
  Downloading poetry-1.1.10-py2.py3-none-any.whl (174 kB)
Collecting cachecontrol[filecache]<0.13.0,>=0.12.4
  Using cached CacheControl-0.12.6-py2.py3-none-any.whl (19 kB)
Collecting shellingham<2.0,>=1.1
  Using cached shellingham-1.4.0-py2.py3-none-any.whl (9.4 kB)
Collecting requests-toolbelt<0.10.0,>=0.9.1
  Using cached requests_toolbelt-0.9.1-py2.py3-none-any.whl (54 kB)
Collecting cachy<0.4.0,>=0.3.0
  Using cached cachy-0.3.0-py2.py3-none-any.whl (20 kB)
Collecting clikit<0.7.0,>=0.6.2
  Using cached clikit-0.6.2-py2.py3-none-any.whl (91 kB)
Requirement already satisfied: requests<3.0,>=2.18 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from poetry) (2.25.1)
Collecting pexpect<5.0.0,>=4.7.0
  Using cached pexpect-4.8.0-py2.py3-none-any.whl (59 kB)
Collecting pkginfo<2.0,>=1.4
  Downloading pkginfo-1.7.1-py2.py3-none-any.whl (25 kB)
Collecting html5lib<2.0,>=1.0
  Using cached html5lib-1.1-py2.py3-none-any.whl (112 kB)
Collecting poetry-core<1.1.0,>=1.0.6
  Downloading poetry_core-1.0.6-py2.py3-none-any.whl (424 kB)
Collecting keyring<22.0.0,>=21.2.0
  Using cached keyring-21.8.0-py3-none-any.whl (32 kB)
Collecting cleo<0.9.0,>=0.8.1
  Using cached cleo-0.8.1-py2.py3-none-any.whl (21 kB)
Collecting tomlkit<1.0.0,>=0.7.0
  Using cached tomlkit-0.7.2-py2.py3-none-any.whl (32 kB)
Collecting crashtest<0.4.0,>=0.3.0
  Using cached crashtest-0.3.1-py3-none-any.whl (7.0 kB)
Collecting packaging<21.0,>=20.4
  Using cached packaging-20.9-py2.py3-none-any.whl (40 kB)
Collecting virtualenv<21.0.0,>=20.0.26
  Downloading virtualenv-20.8.1-py2.py3-none-any.whl (5.3 MB)
Collecting msgpack>=0.5.2
  Using cached msgpack-1.0.2-cp39-cp39-manylinux1_x86_64.whl (294 kB)
Collecting lockfile>=0.9
  Using cached lockfile-0.12.2-py2.py3-none-any.whl (13 kB)
Collecting pylev<2.0,>=1.3
  Using cached pylev-1.4.0-py2.py3-none-any.whl (6.1 kB)
Collecting pastel<0.3.0,>=0.2.0
  Using cached pastel-0.2.1-py2.py3-none-any.whl (6.0 kB)
Collecting webencodings
  Using cached webencodings-0.5.1-py2.py3-none-any.whl (11 kB)
Requirement already satisfied: six>=1.9 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from html5lib<2.0,>=1.0->poetry) (1.16.0)
Collecting SecretStorage>=3.2
  Using cached SecretStorage-3.3.1-py3-none-any.whl (15 kB)
Collecting jeepney>=0.4.2
  Downloading jeepney-0.7.1-py3-none-any.whl (54 kB)
Collecting pyparsing>=2.0.2
  Using cached pyparsing-2.4.7-py2.py3-none-any.whl (67 kB)
Collecting ptyprocess>=0.5
  Using cached ptyprocess-0.7.0-py2.py3-none-any.whl (13 kB)
Requirement already satisfied: idna<3,>=2.5 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from requests<3.0,>=2.18->poetry) (2.10)
Requirement already satisfied: chardet<5,>=3.0.2 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from requests<3.0,>=2.18->poetry) (4.0.0)
Requirement already satisfied: certifi>=2017.4.17 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from requests<3.0,>=2.18->poetry) (2021.5.30)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from requests<3.0,>=2.18->poetry) (1.26.6)
Requirement already satisfied: cryptography>=2.0 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from SecretStorage>=3.2->keyring<22.0.0,>=21.2.0->poetry) (3.4.7)
Requirement already satisfied: cffi>=1.12 in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from cryptography>=2.0->SecretStorage>=3.2->keyring<22.0.0,>=21.2.0->poetry) (1.14.6)
Requirement already satisfied: pycparser in ./.pyenv/versions/miniconda3-latest/lib/python3.9/site-packages (from cffi>=1.12->cryptography>=2.0->SecretStorage>=3.2->keyring<22.0.0,>=21.2.0->poetry) (2.20)
Collecting platformdirs<3,>=2
  Downloading platformdirs-2.4.0-py3-none-any.whl (14 kB)
Collecting backports.entry-points-selectable>=1.0.4
  Downloading backports.entry_points_selectable-1.1.0-py2.py3-none-any.whl (6.2 kB)
Collecting distlib<1,>=0.3.1
  Downloading distlib-0.3.3-py2.py3-none-any.whl (496 kB)
Collecting filelock<4,>=3.0.0
  Downloading filelock-3.3.0-py3-none-any.whl (9.7 kB)
Installing collected packages: pylev, pastel, msgpack, jeepney, crashtest, webencodings, SecretStorage, pyparsing, ptyprocess, platformdirs, lockfile, filelock, distlib, clikit, cachecontrol, backports.entry-points-selectable, virtualenv, tomlkit, shellingham, requests-toolbelt, poetry-core, pkginfo, pexpect, packaging, keyring, html5lib, cleo, cachy, poetry
Successfully installed SecretStorage-3.3.1 backports.entry-points-selectable-1.1.0 cachecontrol-0.12.6 cachy-0.3.0 cleo-0.8.1 clikit-0.6.2 crashtest-0.3.1 distlib-0.3.3 filelock-3.3.0 html5lib-1.1 jeepney-0.7.1 keyring-21.8.0 lockfile-0.12.2 msgpack-1.0.2 packaging-20.9 pastel-0.2.1 pexpect-4.8.0 pkginfo-1.7.1 platformdirs-2.4.0 poetry-1.1.10 poetry-core-1.0.6 ptyprocess-0.7.0 pylev-1.4.0 pyparsing-2.4.7 requests-toolbelt-0.9.1 shellingham-1.4.0 tomlkit-0.7.2 virtualenv-20.8.1 webencodings-0.5.1
Installed poetry.
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=miniconda3-latest \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "rm -rf \$HOME/.pyenv.lock"
[pydelta-next] $ /bin/sh -xe /tmp/jenkins1703239292986545879.sh
+ poetry install
Installing dependencies from lock file

Package operations: 1 install, 9 updates, 0 removals

  • Updating urllib3 (1.26.5 -> 1.26.6)
  • Updating anyio (3.2.0 -> 3.2.1)
  • Installing requests-unixsocket (0.2.0)
  • Updating send2trash (1.5.0 -> 1.7.1)
  • Updating jupyter-server (1.8.0 -> 1.9.0)
  • Updating numpy (1.20.3 -> 1.21.0)
  • Updating scipy (1.6.3 -> 1.7.0)
  • Updating importlib-resources (5.1.4 -> 5.2.0)
  • Updating ipython (7.24.1 -> 7.25.0)
  • Updating pandas (1.2.4 -> 1.2.5)

Installing the current project: delta (2.2.0.dev0)
+ poetry run pytest --no-cov
============================= test session starts ==============================
platform linux -- Python 3.9.1, pytest-6.2.4, py-1.10.0, pluggy-0.13.1
rootdir: /mnt/data/jenkins/workspace/pydelta-next, configfile: pyproject.toml
plugins: cov-2.12.1, notebook-0.6.1, anyio-3.2.1
collected 35 items

delta/graphics.py .                                                      [  2%]
delta/util.py ....                                                       [ 14%]
test/corpus_test.py .................                                    [ 62%]
test/deltas_test.py .........                                            [ 88%]
test/test_issue6.py ....                                                 [100%]

--- generated xml file: /mnt/data/jenkins/workspace/pydelta-next/pytest.xml ----
============================= 35 passed in 43.76s ==============================
+ poetry run sh -c cd docs && make clean html
rm -rf _build/*
sphinx-build -b html -d _build/doctrees   . _build/html
Running Sphinx v4.0.2
making output directory... done
WARNING: html_static_path entry '_static' does not exist
loading intersphinx inventory from http://docs.python.org/objects.inv...
loading intersphinx inventory from http://pandas.pydata.org/pandas-docs/stable/objects.inv...
intersphinx inventory has moved: http://docs.python.org/objects.inv -> https://docs.python.org/3/objects.inv
intersphinx inventory has moved: http://pandas.pydata.org/pandas-docs/stable/objects.inv -> https://pandas.pydata.org/pandas-docs/stable/objects.inv
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 9 source files that are out of date
updating environment: [new config] 9 added, 0 changed, 0 removed
reading sources... [ 11%] CustomizingPipeline
reading sources... [ 22%] GettingStarted
reading sources... [ 33%] README
reading sources... [ 44%] README-branch
reading sources... [ 55%] concept
reading sources... [ 66%] delta
reading sources... [ 77%] index
reading sources... [ 88%] modules
reading sources... [100%] refactoring-notes

/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:37: WARNING: File not found: 'delta.html#delta.corpus.Corpus'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:320: WARNING: File not found: 'delta.html#corpus.Corpus.relative_frequencies'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:320: WARNING: File not found: 'delta.html#corpus.Corpus.get_mfw_table'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:353: WARNING: File not found: 'delta.html#deltas.DistanceMatrix'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:645: WARNING: File not found: 'delta.html#graph.Dendrogram'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:645: WARNING: File not found: 'delta.html#corpus.DocumentDescriber'
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:67: WARNING: Unknown interpreted text role "function".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.tokenize:3: WARNING: Unknown interpreted text role "param".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.metadata:3: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.distance:11: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.iterate_distance:13: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/graphics.py:docstring of delta.graphics.Dendrogram:33: WARNING: Unknown interpreted text role "module".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.tokenize:3: WARNING: Unknown interpreted text role "param".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.FeatureGenerator.metadata:3: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.distance:11: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.iterate_distance:13: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/graphics.py:docstring of delta.graphics.Dendrogram:33: WARNING: Unknown interpreted text role "module".
/mnt/data/jenkins/workspace/pydelta-next/delta/experiments.py:docstring of delta.experiments:13: WARNING: Unknown target name: "facet".
/mnt/data/jenkins/workspace/pydelta-next/delta/experiments.py:docstring of delta.experiments:18: WARNING: Unknown target name: "facet".
/mnt/data/jenkins/workspace/pydelta-next/delta/experiments.py:docstring of delta.experiments:23: WARNING: Unknown target name: "facet".
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:9: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:12: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... done
checking consistency... /mnt/data/jenkins/workspace/pydelta-next/docs/README-branch.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/modules.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 11%] CustomizingPipeline
writing output... [ 22%] GettingStarted
writing output... [ 33%] README
writing output... [ 44%] README-branch
writing output... [ 55%] concept
writing output... [ 66%] delta
writing output... [ 77%] index
writing output... [ 88%] modules
writing output... [100%] refactoring-notes

/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:624: WARNING: undefined label: /delta.rst#cluster.clustering
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:794: WARNING: undefined label: /delta.rst#cluster.flatclustering
/mnt/data/jenkins/workspace/pydelta-next/docs/README.rst:54: WARNING: 'any' reference target not found: pytest
/mnt/data/jenkins/workspace/pydelta-next/docs/README.rst:54: WARNING: 'any' reference target not found: cd docs && make html
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:31: WARNING: more than one target found for 'any' cross-reference 'sort': could be :py:attr:`delta.corpus.FeatureGenerator.sort` or :py:attr:`delta.FeatureGenerator.sort`
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:32: WARNING: 'any' reference target not found: reparse_column
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:33: WARNING: 'any' reference target not found: relativize
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:34: WARNING: more than one target found for 'any' cross-reference 'top_n': could be :py:meth:`delta.corpus.Corpus.top_n` or :py:meth:`delta.Corpus.top_n`
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:35: WARNING: more than one target found for 'any' cross-reference 'cull': could be :py:meth:`delta.corpus.Corpus.cull` or :py:meth:`delta.Corpus.cull`
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:36: WARNING: 'any' reference target not found: normalize
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:50: WARNING: more than one target found for 'any' cross-reference 'normalization': could be :py:func:`delta.deltas.normalization` or :py:func:`delta.normalization`
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator:1: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.count_tokens:1: WARNING: 'any' reference target not found: lines
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.process_file:3: WARNING: 'any' reference target not found: filename
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.SimpleFeatureGenerator.postprocess_tokens:4: WARNING: more than one target found for 'any' cross-reference 'lower_case': could be :py:attr:`delta.corpus.FeatureGenerator.lower_case` or :py:attr:`delta.FeatureGenerator.lower_case`
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.SimpleFeatureGenerator.postprocess_tokens:4: WARNING: more than one target found for 'any' cross-reference 'ngrams': could be :py:attr:`delta.corpus.FeatureGenerator.ngrams` or :py:func:`delta.util.ngrams` or :py:attr:`delta.FeatureGenerator.ngrams`
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.SimpleFeatureGenerator.process_file:3: WARNING: 'any' reference target not found: filename
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:29: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:29: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.new_data:1: WARNING: 'any' reference target not found: DataFrame
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.get_mfw_table:11: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.top_n:6: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction:16: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.iterate_distance:: WARNING: more than one target found for cross-reference 'Corpus': delta.corpus.Corpus, delta.Corpus
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.create_result:: WARNING: more than one target found for cross-reference 'Corpus': delta.corpus.Corpus, delta.Corpus
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.PreprocessingDeltaFunction:7: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.MetricDeltaFunction:18: WARNING: 'any' reference target not found: fix_symmetry
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DistanceMatrix.compare_with:5: WARNING: more than one target found for 'any' cross-reference 'compare_pairwise': could be :py:func:`delta.util.compare_pairwise` or :py:func:`delta.compare_pairwise`
/mnt/data/jenkins/workspace/pydelta-next/delta/graphics.py:docstring of delta.graphics.Dendrogram:: WARNING: more than one target found for cross-reference 'Clustering': delta.cluster.Clustering, delta.Clustering
/mnt/data/jenkins/workspace/pydelta-next/delta/util.py:docstring of delta.util.compare_pairwise:3: WARNING: 'any' reference target not found: :func:ssd.squareform
/mnt/data/jenkins/workspace/pydelta-next/delta/util.py:docstring of delta.util.compare_pairwise:19: WARNING: 'any' reference target not found: :class:np.ufunc
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:29: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:29: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.new_data:1: WARNING: 'any' reference target not found: DataFrame
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.get_mfw_table:11: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.top_n:6: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator:1: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.count_tokens:1: WARNING: 'any' reference target not found: lines
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.process_file:3: WARNING: 'any' reference target not found: filename
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction:16: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.MetricDeltaFunction:18: WARNING: 'any' reference target not found: fix_symmetry
/mnt/data/jenkins/workspace/pydelta-next/delta/__init__.py:docstring of delta.util.compare_pairwise:3: WARNING: 'any' reference target not found: :func:ssd.squareform
/mnt/data/jenkins/workspace/pydelta-next/delta/__init__.py:docstring of delta.util.compare_pairwise:19: WARNING: 'any' reference target not found: :class:np.ufunc
generating indices... genindex py-modindex done
copying notebooks ... [ 50%] CustomizingPipeline.ipynb
copying notebooks ... [100%] GettingStarted.ipynb

highlighting module code... [ 16%] delta.cluster
highlighting module code... [ 33%] delta.corpus
highlighting module code... [ 50%] delta.deltas
highlighting module code... [ 66%] delta.features
highlighting module code... [ 83%] delta.graphics
highlighting module code... [100%] delta.util

writing additional pages... search done
copying images... [ 33%] _build/doctrees/nbsphinx/CustomizingPipeline_11_1.png
copying images... [ 66%] _build/doctrees/nbsphinx/CustomizingPipeline_22_1.png
copying images... [100%] _build/doctrees/nbsphinx/GettingStarted_23_1.png

copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 69 warnings.

The HTML pages are in _build/html.

Build finished. The HTML pages are in _build/html.
[htmlpublisher] Archiving HTML reports...
[htmlpublisher] Archiving at PROJECT level /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html to /mnt/data/jenkins/jobs/pydelta-next/htmlreports/Documentation
ERROR: Specified HTML directory '/mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html' does not exist.
Build step 'Publish HTML reports' changed build result to FAILURE
Recording test results
[Checks API] No suitable checks publisher found.
[Cobertura] Publishing Cobertura coverage report...

[Set GitHub commit status (universal)] ERROR on repos [GHRepository@48b10f7[nodeId=MDEwOlJlcG9zaXRvcnk4NDYzMzk3MQ==,description=an experimental implementation of Burrow's delta in Python 3,homepage=http://dev.digital-humanities.de/ci/job/pydelta-next/Documentation/index.html,name=pydelta,fork=true,archived=false,visibility=public,size=3540,milestones={},language=Python,commits={},isTemplate=<null>,compareUsePaginatedCommits=false,url=https://api.github.com/repos/cophi-wue/pydelta,id=84633971,nodeId=<null>,createdAt=2017-03-11T08:03:36Z,updatedAt=2021-10-01T14:43:33Z]] (sha:35b0614) with context:pydelta-next
Setting commit status on GitHub for https://github.com/cophi-wue/pydelta/commit/35b061403021005713515a9040488e76886b3b48
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
Email was triggered for: Failure - Any
Sending email for trigger: Failure - Any
An attempt to send an e-mail to empty list of recipients, ignored.
Finished: FAILURE