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Started by GitHub push by thvitt Running as SYSTEM Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/pydelta-next The recommended git tool is: NONE using credential Github Cloning the remote Git repository Cloning repository https://github.com/cophi-wue/pydelta > /usr/bin/git init /mnt/data/jenkins/workspace/pydelta-next # timeout=10 Fetching upstream changes from https://github.com/cophi-wue/pydelta > /usr/bin/git --version # timeout=10 > git --version # 'git version 2.20.1' using GIT_ASKPASS to set credentials > /usr/bin/git fetch --tags --force --progress -- https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/* # timeout=10 > /usr/bin/git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10 > /usr/bin/git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > /usr/bin/git rev-parse refs/remotes/origin/next^{commit} # timeout=10 Checking out Revision 66d7fdc6afac7baf3fe52ea0e8e2e7d400988531 (refs/remotes/origin/next) > /usr/bin/git config core.sparsecheckout # timeout=10 > /usr/bin/git checkout -f 66d7fdc6afac7baf3fe52ea0e8e2e7d400988531 # timeout=10 Commit message: "fixed __all__" > /usr/bin/git rev-list --no-walk 1a6856e11aac9aab473c39dbf363668f51a594ff # timeout=10 No emails were triggered. $ bash -c "[ -d \$HOME/.pyenv ]" $ bash -c "cd /mnt/data/jenkins/workspace/pydelta-next && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true" $ bash -c "mkdir \$HOME/.pyenv.lock" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv versions --bare" Updating pyenv... $ bash -c "cd \$HOME/.pyenv && git checkout master && git pull" Already on 'master' Your branch is up to date with 'origin/master'. From https://github.com/yyuu/pyenv 1706436f..bbcecc75 master -> origin/master Updating 1706436f..bbcecc75 Fast-forward plugins/python-build/bin/pyenv-install | 5 +++++ plugins/python-build/test/pyenv.bats | 11 +++++++++++ 2 files changed, 16 insertions(+) Updated pyenv. Installing 3.9.1... $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv install 3.9.1" Downloading Python-3.9.1.tar.xz... -> https://www.python.org/ftp/python/3.9.1/Python-3.9.1.tar.xz Installing Python-3.9.1... WARNING: The Python sqlite3 extension was not compiled. Missing the SQLite3 lib? Installed Python-3.9.1 to /mnt/data/jenkins/.pyenv/versions/3.9.1 Installed 3.9.1. $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv exec pip list" Installing poetry... $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv exec pip install poetry" Collecting poetry Downloading poetry-1.1.6-py2.py3-none-any.whl (172 kB) Collecting pkginfo<2.0,>=1.4 Downloading pkginfo-1.7.0-py2.py3-none-any.whl (25 kB) Collecting poetry-core<1.1.0,>=1.0.3 Downloading poetry_core-1.0.3-py2.py3-none-any.whl (424 kB) Collecting keyring<22.0.0,>=21.2.0; python_version >= "3.6" and python_version < "4.0" Downloading keyring-21.8.0-py3-none-any.whl (32 kB) Collecting cachecontrol[filecache]<0.13.0,>=0.12.4 Downloading CacheControl-0.12.6-py2.py3-none-any.whl (19 kB) Collecting cachy<0.4.0,>=0.3.0 Downloading cachy-0.3.0-py2.py3-none-any.whl (20 kB) Collecting crashtest<0.4.0,>=0.3.0; python_version >= "3.6" and python_version < "4.0" Downloading crashtest-0.3.1-py3-none-any.whl (7.0 kB) Collecting pexpect<5.0.0,>=4.7.0 Using cached pexpect-4.8.0-py2.py3-none-any.whl (59 kB) Collecting requests-toolbelt<0.10.0,>=0.9.1 Downloading requests_toolbelt-0.9.1-py2.py3-none-any.whl (54 kB) Collecting clikit<0.7.0,>=0.6.2 Downloading clikit-0.6.2-py2.py3-none-any.whl (91 kB) Collecting shellingham<2.0,>=1.1 Downloading shellingham-1.4.0-py2.py3-none-any.whl (9.4 kB) Collecting virtualenv<21.0.0,>=20.0.26 Using cached virtualenv-20.4.7-py2.py3-none-any.whl (7.2 MB) Collecting html5lib<2.0,>=1.0 Downloading html5lib-1.1-py2.py3-none-any.whl (112 kB) Collecting requests<3.0,>=2.18 Using cached requests-2.25.1-py2.py3-none-any.whl (61 kB) Collecting cleo<0.9.0,>=0.8.1 Downloading cleo-0.8.1-py2.py3-none-any.whl (21 kB) Collecting tomlkit<1.0.0,>=0.7.0 Downloading tomlkit-0.7.2-py2.py3-none-any.whl (32 kB) Collecting packaging<21.0,>=20.4 Using cached packaging-20.9-py2.py3-none-any.whl (40 kB) Collecting jeepney>=0.4.2; sys_platform == "linux" Downloading jeepney-0.6.0-py3-none-any.whl (45 kB) Collecting SecretStorage>=3.2; sys_platform == "linux" Downloading SecretStorage-3.3.1-py3-none-any.whl (15 kB) Collecting msgpack>=0.5.2 Downloading msgpack-1.0.2-cp39-cp39-manylinux1_x86_64.whl (294 kB) Collecting lockfile>=0.9; extra == "filecache" Downloading lockfile-0.12.2-py2.py3-none-any.whl (13 kB) Collecting ptyprocess>=0.5 Using cached ptyprocess-0.7.0-py2.py3-none-any.whl (13 kB) Collecting pastel<0.3.0,>=0.2.0 Downloading pastel-0.2.1-py2.py3-none-any.whl (6.0 kB) Collecting pylev<2.0,>=1.3 Downloading pylev-1.4.0-py2.py3-none-any.whl (6.1 kB) Collecting six<2,>=1.9.0 Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Collecting appdirs<2,>=1.4.3 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB) Collecting filelock<4,>=3.0.0 Using cached filelock-3.0.12-py3-none-any.whl (7.6 kB) Collecting distlib<1,>=0.3.1 Using cached distlib-0.3.2-py2.py3-none-any.whl (338 kB) Collecting webencodings Using cached webencodings-0.5.1-py2.py3-none-any.whl (11 kB) Collecting chardet<5,>=3.0.2 Using cached chardet-4.0.0-py2.py3-none-any.whl (178 kB) Collecting idna<3,>=2.5 Using cached idna-2.10-py2.py3-none-any.whl (58 kB) Collecting certifi>=2017.4.17 Using cached certifi-2021.5.30-py2.py3-none-any.whl (145 kB) Collecting urllib3<1.27,>=1.21.1 Using cached urllib3-1.26.5-py2.py3-none-any.whl (138 kB) Collecting pyparsing>=2.0.2 Using cached pyparsing-2.4.7-py2.py3-none-any.whl (67 kB) Collecting cryptography>=2.0 Downloading cryptography-3.4.7-cp36-abi3-manylinux2014_x86_64.whl (3.2 MB) Collecting cffi>=1.12 Downloading cffi-1.14.5-cp39-cp39-manylinux1_x86_64.whl (406 kB) Collecting pycparser Downloading pycparser-2.20-py2.py3-none-any.whl (112 kB) Installing collected packages: pkginfo, poetry-core, jeepney, pycparser, cffi, cryptography, SecretStorage, keyring, chardet, idna, certifi, urllib3, requests, msgpack, lockfile, cachecontrol, cachy, crashtest, ptyprocess, pexpect, requests-toolbelt, pastel, pylev, clikit, shellingham, six, appdirs, filelock, distlib, virtualenv, webencodings, html5lib, cleo, tomlkit, pyparsing, packaging, poetry Successfully installed SecretStorage-3.3.1 appdirs-1.4.4 cachecontrol-0.12.6 cachy-0.3.0 certifi-2021.5.30 cffi-1.14.5 chardet-4.0.0 cleo-0.8.1 clikit-0.6.2 crashtest-0.3.1 cryptography-3.4.7 distlib-0.3.2 filelock-3.0.12 html5lib-1.1 idna-2.10 jeepney-0.6.0 keyring-21.8.0 lockfile-0.12.2 msgpack-1.0.2 packaging-20.9 pastel-0.2.1 pexpect-4.8.0 pkginfo-1.7.0 poetry-1.1.6 poetry-core-1.0.3 ptyprocess-0.7.0 pycparser-2.20 pylev-1.4.0 pyparsing-2.4.7 requests-2.25.1 requests-toolbelt-0.9.1 shellingham-1.4.0 six-1.16.0 tomlkit-0.7.2 urllib3-1.26.5 virtualenv-20.4.7 webencodings-0.5.1 WARNING: You are using pip version 20.2.3; however, version 21.1.2 is available. You should consider upgrading via the '/mnt/data/jenkins/.pyenv/versions/3.9.1/bin/python3.9 -m pip install --upgrade pip' command. Installed poetry. $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.9.1 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "rm -rf \$HOME/.pyenv.lock" [pydelta-next] $ /bin/sh -xe /tmp/jenkins7146834688501395830.sh + poetry install Creating virtualenv delta-Q1Pfn9b--py3.9 in /mnt/data/jenkins/.cache/pypoetry/virtualenvs Updating dependencies Resolving dependencies... Writing lock file Package operations: 79 installs, 0 updates, 0 removals • Installing ipython-genutils (0.2.0) • Installing attrs (21.2.0) • Installing pyrsistent (0.17.3) • Installing six (1.16.0) • Installing traitlets (5.0.5) • Installing jsonschema (3.2.0) • Installing jupyter-core (4.7.1) • Installing nest-asyncio (1.5.1) • Installing pyparsing (2.4.7) • Installing python-dateutil (2.8.1) • Installing pyzmq (22.1.0) • Installing tornado (6.1) • Installing async-generator (1.10) • Installing certifi (2021.5.30) • Installing chardet (4.0.0) • Installing idna (2.10) • Installing jupyter-client (6.2.0) • Installing markupsafe (2.0.1) • Installing nbformat (5.1.3) • Installing numpy (1.20.3) • Installing packaging (20.9) • Installing ptyprocess (0.7.0) • Installing parso (0.8.2) • Installing pygments (2.9.0) • Installing pytz (2021.1) • Installing urllib3 (1.26.5) • Installing wcwidth (0.2.5) • Installing webencodings (0.5.1) • Installing alabaster (0.7.12) • Installing babel (2.9.1) • Installing backcall (0.2.0) • Installing bleach (3.3.0) • Installing decorator (5.0.9) • Installing defusedxml (0.7.1) • Installing docutils (0.17.1) • Installing entrypoints (0.3) • Installing imagesize (1.2.0) • Installing iniconfig (1.1.1) • Installing jedi (0.18.0) • Installing jinja2 (3.0.1) • Installing joblib (1.0.1) • Installing jupyterlab-pygments (0.1.2) • Installing matplotlib-inline (0.1.2) • Installing mistune (0.8.4) • Installing nbclient (0.5.3) • Installing pandocfilters (1.4.3) • Installing pexpect (4.8.0) • Installing pickleshare (0.7.5) • Installing pluggy (0.13.1) • Installing prompt-toolkit (3.0.18) • Installing py (1.10.0) • Installing requests (2.25.1) • Installing scipy (1.6.3) • Installing snowballstemmer (2.1.0) • Installing sphinxcontrib-applehelp (1.0.2) • Installing sphinxcontrib-devhelp (1.0.2) • Installing sphinxcontrib-htmlhelp (2.0.0) • Installing sphinxcontrib-jsmath (1.0.1) • Installing sphinxcontrib-qthelp (1.0.3) • Installing sphinxcontrib-serializinghtml (1.1.5) • Installing testpath (0.5.0) • Installing threadpoolctl (2.1.0) • Installing toml (0.10.2) • Installing coverage (5.5) • Installing cycler (0.10.0) • Installing ipython (7.24.1) • Installing kiwisolver (1.3.1) • Installing nbconvert (6.0.7) • Installing pytest (6.2.4) • Installing pillow (8.2.0) • Installing scikit-learn (0.24.2) • Installing sphinx (4.0.2) • Installing ipykernel (5.5.5) • Installing matplotlib (3.4.2) • Installing nbsphinx (0.8.6) • Installing pandas (1.2.4) • Installing pytest-cov (2.12.1) • Installing regex (2021.4.4) • Installing scikit-learn-extra (0.2.0) Installing the current project: delta (2.1.0.dev1) + poetry run pytest Traceback (most recent call last): File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/bin/pytest", line 8, in <module> sys.exit(console_main()) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/config/__init__.py", line 185, in console_main code = main() File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/config/__init__.py", line 143, in main config = _prepareconfig(args, plugins) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/config/__init__.py", line 318, in _prepareconfig config = pluginmanager.hook.pytest_cmdline_parse( File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/hooks.py", line 286, in __call__ return self._hookexec(self, self.get_hookimpls(), kwargs) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/manager.py", line 93, in _hookexec return self._inner_hookexec(hook, methods, kwargs) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/manager.py", line 84, in <lambda> self._inner_hookexec = lambda hook, methods, kwargs: hook.multicall( File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/callers.py", line 203, in _multicall gen.send(outcome) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/helpconfig.py", line 100, in pytest_cmdline_parse config: Config = outcome.get_result() File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/callers.py", line 80, in get_result raise ex[1].with_traceback(ex[2]) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/callers.py", line 187, in _multicall res = hook_impl.function(*args) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/config/__init__.py", line 1003, in pytest_cmdline_parse self.parse(args) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/config/__init__.py", line 1283, in parse self._preparse(args, addopts=addopts) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/config/__init__.py", line 1172, in _preparse self.pluginmanager.load_setuptools_entrypoints("pytest11") File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pluggy/manager.py", line 299, in load_setuptools_entrypoints plugin = ep.load() File "/mnt/data/jenkins/.pyenv/versions/3.9.1/lib/python3.9/importlib/metadata.py", line 77, in load module = import_module(match.group('module')) File "/mnt/data/jenkins/.pyenv/versions/3.9.1/lib/python3.9/importlib/__init__.py", line 127, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "<frozen importlib._bootstrap>", line 1030, in _gcd_import File "<frozen importlib._bootstrap>", line 1007, in _find_and_load File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked File "<frozen importlib._bootstrap>", line 680, in _load_unlocked File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/_pytest/assertion/rewrite.py", line 170, in exec_module exec(co, module.__dict__) File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/pytest_cov/plugin.py", line 6, in <module> import coverage File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/coverage/__init__.py", line 15, in <module> from coverage.control import Coverage, process_startup File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/coverage/control.py", line 21, in <module> from coverage.data import CoverageData, combine_parallel_data File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/coverage/data.py", line 17, in <module> from coverage.sqldata import CoverageData File "/mnt/data/jenkins/.cache/pypoetry/virtualenvs/delta-Q1Pfn9b--py3.9/lib/python3.9/site-packages/coverage/sqldata.py", line 15, in <module> import sqlite3 File "/mnt/data/jenkins/.pyenv/versions/3.9.1/lib/python3.9/sqlite3/__init__.py", line 23, in <module> from sqlite3.dbapi2 import * File "/mnt/data/jenkins/.pyenv/versions/3.9.1/lib/python3.9/sqlite3/dbapi2.py", line 27, in <module> from _sqlite3 import * ModuleNotFoundError: No module named '_sqlite3' Build step 'Execute shell' marked build as failure [htmlpublisher] Archiving HTML reports... [htmlpublisher] Archiving at PROJECT level /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html to /mnt/data/jenkins/jobs/pydelta-next/htmlreports/Documentation ERROR: Specified HTML directory '/mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html' does not exist. Recording test results ERROR: Step ‘Publish JUnit test result report’ failed: No test report files were found. Configuration error? [Cobertura] Publishing Cobertura coverage report... [Set GitHub commit status (universal)] ERROR on repos [GHRepository@4dacbb5a[nodeId=MDEwOlJlcG9zaXRvcnk4NDYzMzk3MQ==,description=an experimental implementation of Burrow's delta in Python 3,homepage=http://dev.digital-humanities.de/ci/job/pydelta-next/Documentation/index.html,name=pydelta,fork=true,archived=false,size=3005,milestones={},language=Jupyter Notebook,commits={},isTemplate=<null>,url=https://api.github.com/repos/cophi-wue/pydelta,id=84633971,nodeId=<null>,createdAt=2017-03-11T08:03:36Z,updatedAt=2021-06-15T17:42:12Z]] (sha:66d7fdc) with context:pydelta-next Setting commit status on GitHub for https://github.com/cophi-wue/pydelta/commit/66d7fdc6afac7baf3fe52ea0e8e2e7d400988531 Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds Notifying upstream projects of job completion Email was triggered for: Failure - Any Sending email for trigger: Failure - Any Sending email to: thorsten.vitt@uni-wuerzburg.de Finished: FAILURE