Console Output
Started by user Thorsten Vitt
Building remotely on build3 (digibib) in workspace /mnt/data/jenkins/workspace/faust-macrogen
[ssh-agent] Looking for ssh-agent implementation...
[ssh-agent] Exec ssh-agent (binary ssh-agent on a remote machine)
$ ssh-agent
SSH_AUTH_SOCK=/tmp/ssh-hyPOoxwicNwf/agent.19396
SSH_AGENT_PID=19398
[ssh-agent] Started.
$ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_5758834341068485806.key
Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_5758834341068485806.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_5758834341068485806.key)
[ssh-agent] Using credentials git
$ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_2850392768807835116.key
Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_2850392768807835116.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_2850392768807835116.key)
[ssh-agent] Using credentials jenkins (wrzh075.rzhousing.uni-wuerzburg.de)
Cloning the remote Git repository
Cloning repository git://github.com/faustedition/faust-macrogen
> /usr/bin/git init /mnt/data/jenkins/workspace/faust-macrogen # timeout=10
Fetching upstream changes from git://github.com/faustedition/faust-macrogen
> /usr/bin/git --version # timeout=10
using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de
> /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/*
> /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10
> /usr/bin/git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
> /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10
Fetching upstream changes from git://github.com/faustedition/faust-macrogen
using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de
> /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/*
> /usr/bin/git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> /usr/bin/git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e (refs/remotes/origin/master)
> /usr/bin/git config core.sparsecheckout # timeout=10
> /usr/bin/git checkout -f b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e
Commit message: "Improved report pages"
> /usr/bin/git rev-list --no-walk b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e # timeout=10
$ bash -c "[ -d \$HOME/.pyenv ]"
$ bash -c "cd /mnt/data/jenkins/workspace/faust-macrogen && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true"
$ bash -c "mkdir \$HOME/.pyenv.lock"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv versions --bare"
Updating pyenv...
$ bash -c "cd \$HOME/.pyenv && git checkout master && git pull"
Already on 'master'
Your branch is up to date with 'origin/master'.
From https://github.com/yyuu/pyenv
8eeddae..97f244f master -> origin/master
* [new tag] v1.2.6 -> v1.2.6
* [new tag] v1.2.5 -> v1.2.5
Updating 8eeddae..97f244f
Fast-forward
.github/PULL_REQUEST_TEMPLATE.md | 6 +++---
CHANGELOG.md | 12 ++++++++++++
libexec/pyenv---version | 2 +-
libexec/pyenv-rehash | 2 +-
plugins/python-build/bin/python-build | 13 +++++--------
.../share/python-build/{3.7.0b5 => 3.6.6} | 4 ++--
.../share/python-build/{3.5.5rc1 => 3.6.6rc1} | 4 ++--
plugins/python-build/share/python-build/3.7.0 | 8 ++++++++
.../python-build/share/python-build/anaconda2-5.2.0 | 19 +++++++++++++++++++
.../python-build/share/python-build/anaconda3-5.2.0 | 19 +++++++++++++++++++
10 files changed, 72 insertions(+), 17 deletions(-)
rename plugins/python-build/share/python-build/{3.7.0b5 => 3.6.6} (51%)
rename plugins/python-build/share/python-build/{3.5.5rc1 => 3.6.6rc1} (50%)
create mode 100644 plugins/python-build/share/python-build/3.7.0
create mode 100644 plugins/python-build/share/python-build/anaconda2-5.2.0
create mode 100644 plugins/python-build/share/python-build/anaconda3-5.2.0
Updated pyenv.
Installing 3.6.6...
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv install 3.6.6"
Downloading Python-3.6.6.tar.xz...
-> https://www.python.org/ftp/python/3.6.6/Python-3.6.6.tar.xz
Installing Python-3.6.6...
Installed Python-3.6.6 to /mnt/data/jenkins/.pyenv/versions/3.6.6
Installed 3.6.6.
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv exec pip list"
$ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash"
$ bash -c "rm -rf \$HOME/.pyenv.lock"
[faust-macrogen] $ /bin/sh -xe /tmp/jenkins4824261211888107503.sh
+ pipenv install
Creating a virtualenv for this project…
Using /mnt/data/jenkins/.pyenv/versions/3.6.6/bin/python3.6m (3.6.6) to create virtualenv…
Running virtualenv with interpreter /mnt/data/jenkins/.pyenv/versions/3.6.6/bin/python3.6m
Using base prefix '/mnt/data/jenkins/.pyenv/versions/3.6.6'
New python executable in /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/bin/python3.6m
Also creating executable in /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/bin/python
Installing setuptools, pip, wheel...done.
Virtualenv location: /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf
Installing dependencies from Pipfile.lock (8f5326)…
To activate this project's virtualenv, run the following:
$ pipenv shell
+ pipenv run ./main.py
/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88
return f(*args, **kwds)
[33mWARNING datings Skipping row ['Reference', 'Weight']: invalid literal for int() with base 10: 'Weight'[0m
Traceback (most recent call last):
File "./main.py", line 6, in <module>
import graph
File "/mnt/data/jenkins/workspace/faust-macrogen/graph.py", line 12, in <module>
from datings import base_graph
File "/mnt/data/jenkins/workspace/faust-macrogen/datings.py", line 68, in <module>
_bib_db = _parse_bibliography('bibliography.xml')
File "/mnt/data/jenkins/workspace/faust-macrogen/datings.py", line 44, in _parse_bibliography
et = etree.parse(url)
File "src/lxml/etree.pyx", line 3426, in lxml.etree.parse
File "src/lxml/parser.pxi", line 1840, in lxml.etree._parseDocument
File "src/lxml/parser.pxi", line 1866, in lxml.etree._parseDocumentFromURL
File "src/lxml/parser.pxi", line 1770, in lxml.etree._parseDocFromFile
File "src/lxml/parser.pxi", line 1163, in lxml.etree._BaseParser._parseDocFromFile
File "src/lxml/parser.pxi", line 601, in lxml.etree._ParserContext._handleParseResultDoc
File "src/lxml/parser.pxi", line 711, in lxml.etree._handleParseResult
File "src/lxml/parser.pxi", line 638, in lxml.etree._raiseParseError
OSError: Error reading file 'bibliography.xml': failed to load external entity "bibliography.xml"
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 19398 killed;
[ssh-agent] Stopped.
[BFA] Scanning build for known causes...
[BFA] No failure causes found
[BFA] Done. 0s
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
Finished: FAILURE
![[Jenkins]](/ci/static/5d841056/images/svgs/logo.svg){kind=logo}
