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Started by GitHub push by MHuberFaust Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/DARIAH-Topics > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/DARIAH-DE/Topics # timeout=10 Fetching upstream changes from https://github.com/DARIAH-DE/Topics > git --version # timeout=10 using GIT_ASKPASS to set credentials > git fetch --tags --progress https://github.com/DARIAH-DE/Topics +refs/heads/*:refs/remotes/origin/* > git rev-parse refs/remotes/origin/testing^{commit} # timeout=10 > git rev-parse refs/remotes/origin/origin/testing^{commit} # timeout=10 Checking out Revision f8669dd06e1c9db5d9623d63ccf29cbd3e1f892b (refs/remotes/origin/testing) Commit message: "docstrings added" > git config core.sparsecheckout # timeout=10 > git checkout -f f8669dd06e1c9db5d9623d63ccf29cbd3e1f892b > git rev-list 822cd6e474c4efddfa84f4d67411a97ea78db5ab # timeout=10 [DARIAH-Topics] $ /usr/bin/python3 /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenv.py /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9 Using base prefix '/usr' New python executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python3 Also creating executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python Installing setuptools, pip, wheel...done. [DARIAH-Topics] $ /bin/sh -xe /tmp/shiningpanda5626695436965842903.sh + pip install -U pip Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages + pip install -U -r requirements-dev.txt Obtaining file:///mnt/data/jenkins/workspace/DARIAH-Topics (from -r requirements.txt (line 1)) dariah-topics 0.2.0.dev0 does not provide the extra 'evaluation' Collecting nose (from -r requirements-dev.txt (line 2)) Using cached nose-1.3.7-py3-none-any.whl Collecting nosexcover (from -r requirements-dev.txt (line 3)) Using cached nosexcover-1.0.11-py2.py3-none-any.whl Collecting jupyter (from -r requirements-dev.txt (line 4)) Using cached jupyter-1.0.0-py2.py3-none-any.whl Collecting pandas>=0.19.2 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached pandas-0.20.3-cp35-cp35m-manylinux1_x86_64.whl Collecting regex>=2017.01.14 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting gensim>=0.13.2 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting lda>=1.0.5 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached lda-1.0.5-cp35-cp35m-manylinux1_x86_64.whl Collecting numpy>=1.3 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached numpy-1.13.1-cp35-cp35m-manylinux1_x86_64.whl Collecting scipy>=0.7 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached scipy-0.19.1-cp35-cp35m-manylinux1_x86_64.whl Collecting lxml>=3.6.4 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached lxml-3.8.0-cp35-cp35m-manylinux1_x86_64.whl Collecting flask>=0.11.1 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached Flask-0.12.2-py2.py3-none-any.whl Collecting matplotlib>=1.5.3 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached matplotlib-2.0.2-cp35-cp35m-manylinux1_x86_64.whl Collecting bokeh>=0.12.6 (from dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting coverage>=3.4 (from nosexcover->-r requirements-dev.txt (line 3)) Using cached coverage-4.4.1-cp35-cp35m-manylinux1_x86_64.whl Collecting notebook (from jupyter->-r requirements-dev.txt (line 4)) Using cached notebook-5.0.0-py2.py3-none-any.whl Collecting ipykernel (from jupyter->-r requirements-dev.txt (line 4)) Using cached ipykernel-4.6.1-py3-none-any.whl Collecting jupyter-console (from jupyter->-r requirements-dev.txt (line 4)) Using cached jupyter_console-5.1.0-py2.py3-none-any.whl Collecting qtconsole (from jupyter->-r requirements-dev.txt (line 4)) Using cached qtconsole-4.3.0-py2.py3-none-any.whl Collecting nbconvert (from jupyter->-r requirements-dev.txt (line 4)) Using cached nbconvert-5.2.1-py2.py3-none-any.whl Collecting ipywidgets (from jupyter->-r requirements-dev.txt (line 4)) Using cached ipywidgets-6.0.0-py2.py3-none-any.whl Collecting pytz>=2011k (from pandas>=0.19.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached pytz-2017.2-py2.py3-none-any.whl Collecting python-dateutil>=2 (from pandas>=0.19.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached python_dateutil-2.6.1-py2.py3-none-any.whl Collecting six>=1.5.0 (from gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached six-1.10.0-py2.py3-none-any.whl Collecting smart-open>=1.2.1 (from gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting pbr>=0.6 (from lda>=1.0.5->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached pbr-3.1.1-py2.py3-none-any.whl Collecting Werkzeug>=0.7 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached Werkzeug-0.12.2-py2.py3-none-any.whl Collecting itsdangerous>=0.21 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting click>=2.0 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached click-6.7-py2.py3-none-any.whl Collecting Jinja2>=2.4 (from flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached Jinja2-2.9.6-py2.py3-none-any.whl Collecting pyparsing!=2.0.0,!=2.0.4,!=2.1.2,!=2.1.6,>=1.5.6 (from matplotlib>=1.5.3->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached pyparsing-2.2.0-py2.py3-none-any.whl Collecting cycler>=0.10 (from matplotlib>=1.5.3->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached cycler-0.10.0-py2.py3-none-any.whl Collecting bkcharts>=0.2 (from bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting PyYAML>=3.10 (from bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting requests>=1.2.3 (from bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Downloading requests-2.18.3-py2.py3-none-any.whl (88kB) Collecting tornado>=4.3 (from bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting terminado>=0.3.3; sys_platform != "win32" (from notebook->jupyter->-r requirements-dev.txt (line 4)) Collecting jupyter-client (from notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached jupyter_client-5.1.0-py2.py3-none-any.whl Collecting traitlets>=4.2.1 (from notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached traitlets-4.3.2-py2.py3-none-any.whl Collecting ipython-genutils (from notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached ipython_genutils-0.2.0-py2.py3-none-any.whl Collecting nbformat (from notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached nbformat-4.3.0-py2.py3-none-any.whl Collecting jupyter-core (from notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached jupyter_core-4.3.0-py2.py3-none-any.whl Collecting ipython>=4.0.0 (from ipykernel->jupyter->-r requirements-dev.txt (line 4)) Using cached ipython-6.1.0-py3-none-any.whl Collecting pygments (from jupyter-console->jupyter->-r requirements-dev.txt (line 4)) Using cached Pygments-2.2.0-py2.py3-none-any.whl Collecting prompt-toolkit<2.0.0,>=1.0.0 (from jupyter-console->jupyter->-r requirements-dev.txt (line 4)) Using cached prompt_toolkit-1.0.15-py3-none-any.whl Collecting bleach (from nbconvert->jupyter->-r requirements-dev.txt (line 4)) Using cached bleach-2.0.0-py2.py3-none-any.whl Collecting mistune!=0.6 (from nbconvert->jupyter->-r requirements-dev.txt (line 4)) Using cached mistune-0.7.4-py2.py3-none-any.whl Collecting testpath (from nbconvert->jupyter->-r requirements-dev.txt (line 4)) Using cached testpath-0.3.1-py2.py3-none-any.whl Collecting entrypoints>=0.2.2 (from nbconvert->jupyter->-r requirements-dev.txt (line 4)) Using cached entrypoints-0.2.3-py2.py3-none-any.whl Collecting pandocfilters>=1.4.1 (from nbconvert->jupyter->-r requirements-dev.txt (line 4)) Downloading pandocfilters-1.4.2.tar.gz Collecting widgetsnbextension~=2.0.0 (from ipywidgets->jupyter->-r requirements-dev.txt (line 4)) Using cached widgetsnbextension-2.0.0-py2.py3-none-any.whl Collecting boto>=2.32 (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached boto-2.48.0-py2.py3-none-any.whl Collecting bz2file (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting MarkupSafe>=0.23 (from Jinja2>=2.4->flask>=0.11.1->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Collecting urllib3<1.23,>=1.21.1 (from requests>=1.2.3->bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached urllib3-1.22-py2.py3-none-any.whl Collecting certifi>=2017.4.17 (from requests>=1.2.3->bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached certifi-2017.7.27.1-py2.py3-none-any.whl Collecting idna<2.6,>=2.5 (from requests>=1.2.3->bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached idna-2.5-py2.py3-none-any.whl Collecting chardet<3.1.0,>=3.0.2 (from requests>=1.2.3->bokeh>=0.12.6->dariah-topics==0.2.0.dev0->-r requirements.txt (line 1)) Using cached chardet-3.0.4-py2.py3-none-any.whl Collecting ptyprocess (from terminado>=0.3.3; sys_platform != "win32"->notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached ptyprocess-0.5.2-py2.py3-none-any.whl Collecting pyzmq>=13 (from jupyter-client->notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached pyzmq-16.0.2-cp35-cp35m-manylinux1_x86_64.whl Collecting decorator (from traitlets>=4.2.1->notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached decorator-4.1.2-py2.py3-none-any.whl Collecting jsonschema!=2.5.0,>=2.4 (from nbformat->notebook->jupyter->-r requirements-dev.txt (line 4)) Using cached jsonschema-2.6.0-py2.py3-none-any.whl Collecting jedi>=0.10 (from ipython>=4.0.0->ipykernel->jupyter->-r requirements-dev.txt (line 4)) Using cached jedi-0.10.2-py2.py3-none-any.whl Collecting pickleshare (from ipython>=4.0.0->ipykernel->jupyter->-r requirements-dev.txt (line 4)) Using cached pickleshare-0.7.4-py2.py3-none-any.whl Collecting simplegeneric>0.8 (from ipython>=4.0.0->ipykernel->jupyter->-r requirements-dev.txt (line 4)) Collecting pexpect; sys_platform != "win32" (from ipython>=4.0.0->ipykernel->jupyter->-r requirements-dev.txt (line 4)) Using cached pexpect-4.2.1-py2.py3-none-any.whl Requirement already up-to-date: setuptools>=18.5 in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->jupyter->-r requirements-dev.txt (line 4)) Collecting wcwidth (from prompt-toolkit<2.0.0,>=1.0.0->jupyter-console->jupyter->-r requirements-dev.txt (line 4)) Using cached wcwidth-0.1.7-py2.py3-none-any.whl Collecting html5lib>=0.99999999 (from bleach->nbconvert->jupyter->-r requirements-dev.txt (line 4)) Using cached html5lib-0.999999999-py2.py3-none-any.whl Collecting webencodings (from html5lib>=0.99999999->bleach->nbconvert->jupyter->-r requirements-dev.txt (line 4)) Using cached webencodings-0.5.1-py2.py3-none-any.whl Building wheels for collected packages: pandocfilters Running setup.py bdist_wheel for pandocfilters: started Running setup.py bdist_wheel for pandocfilters: finished with status 'done' Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/08/5b/5b/66b3cde6f8215f8345479ef3699d6ddbb860f6ea7072008f8b Successfully built pandocfilters Installing collected packages: nose, coverage, nosexcover, tornado, ptyprocess, terminado, ipython-genutils, six, decorator, traitlets, jupyter-core, pyzmq, python-dateutil, jupyter-client, jsonschema, nbformat, jedi, wcwidth, prompt-toolkit, pickleshare, simplegeneric, pygments, pexpect, ipython, ipykernel, webencodings, html5lib, bleach, mistune, testpath, entrypoints, pandocfilters, MarkupSafe, Jinja2, nbconvert, notebook, jupyter-console, qtconsole, widgetsnbextension, ipywidgets, jupyter, numpy, pytz, pandas, regex, scipy, urllib3, certifi, idna, chardet, requests, boto, bz2file, smart-open, gensim, pbr, lda, lxml, Werkzeug, itsdangerous, click, flask, pyparsing, cycler, matplotlib, bkcharts, PyYAML, bokeh, dariah-topics Running setup.py develop for dariah-topics Successfully installed Jinja2-2.9.6 MarkupSafe-1.0 PyYAML-3.12 Werkzeug-0.12.2 bkcharts-0.2 bleach-2.0.0 bokeh-0.12.6 boto-2.48.0 bz2file-0.98 certifi-2017.7.27.1 chardet-3.0.4 click-6.7 coverage-4.4.1 cycler-0.10.0 dariah-topics decorator-4.1.2 entrypoints-0.2.3 flask-0.12.2 gensim-2.3.0 html5lib-0.999999999 idna-2.5 ipykernel-4.6.1 ipython-6.1.0 ipython-genutils-0.2.0 ipywidgets-6.0.0 itsdangerous-0.24 jedi-0.10.2 jsonschema-2.6.0 jupyter-1.0.0 jupyter-client-5.1.0 jupyter-console-5.1.0 jupyter-core-4.3.0 lda-1.0.5 lxml-3.8.0 matplotlib-2.0.2 mistune-0.7.4 nbconvert-5.2.1 nbformat-4.3.0 nose-1.3.7 nosexcover-1.0.11 notebook-5.0.0 numpy-1.13.1 pandas-0.20.3 pandocfilters-1.4.2 pbr-3.1.1 pexpect-4.2.1 pickleshare-0.7.4 prompt-toolkit-1.0.15 ptyprocess-0.5.2 pygments-2.2.0 pyparsing-2.2.0 python-dateutil-2.6.1 pytz-2017.2 pyzmq-16.0.2 qtconsole-4.3.0 regex-2017.7.28 requests-2.18.3 scipy-0.19.1 simplegeneric-0.8.1 six-1.10.0 smart-open-1.5.3 terminado-0.6 testpath-0.3.1 tornado-4.5.1 traitlets-4.3.2 urllib3-1.22 wcwidth-0.1.7 webencodings-0.5.1 widgetsnbextension-2.0.0 + ./setup.py sdist bdist_wheel running sdist running egg_info writing top-level names to dariah_topics.egg-info/top_level.txt writing requirements to dariah_topics.egg-info/requires.txt writing dependency_links to dariah_topics.egg-info/dependency_links.txt writing dariah_topics.egg-info/PKG-INFO reading manifest file 'dariah_topics.egg-info/SOURCES.txt' writing manifest file 'dariah_topics.egg-info/SOURCES.txt' /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/setuptools/dist.py:341: UserWarning: Normalizing '0.2.0dev0' to '0.2.0.dev0' normalized_version, warning: sdist: standard file not found: should have one of README, README.rst, README.txt running check warning: check: missing required meta-data: url creating dariah_topics-0.2.0.dev0 creating dariah_topics-0.2.0.dev0/dariah_topics creating dariah_topics-0.2.0.dev0/dariah_topics.egg-info creating dariah_topics-0.2.0.dev0/test copying files to dariah_topics-0.2.0.dev0... copying setup.cfg -> dariah_topics-0.2.0.dev0 copying setup.py -> dariah_topics-0.2.0.dev0 copying dariah_topics/__init__.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics/doclist.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics/evaluation.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics/mallet.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics/meta.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics/preprocessing.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics/visualization.py -> dariah_topics-0.2.0.dev0/dariah_topics copying dariah_topics.egg-info/PKG-INFO -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info copying dariah_topics.egg-info/SOURCES.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info copying dariah_topics.egg-info/dependency_links.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info copying dariah_topics.egg-info/requires.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info copying dariah_topics.egg-info/top_level.txt -> dariah_topics-0.2.0.dev0/dariah_topics.egg-info copying test/test_fuzzy_segmenting.py -> dariah_topics-0.2.0.dev0/test Writing dariah_topics-0.2.0.dev0/setup.cfg Creating tar archive removing 'dariah_topics-0.2.0.dev0' (and everything under it) running bdist_wheel running build running build_py copying dariah_topics/evaluation.py -> build/lib/dariah_topics copying dariah_topics/visualization.py -> build/lib/dariah_topics installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/preprocessing.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/model_creation.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/meta.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/mallet.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/evaluation.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/__init__.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/doclist.py -> build/bdist.linux-x86_64/wheel/dariah_topics copying build/lib/dariah_topics/visualization.py -> build/bdist.linux-x86_64/wheel/dariah_topics running install_egg_info Copying dariah_topics.egg-info to build/bdist.linux-x86_64/wheel/dariah_topics-0.2.0.dev0-py3.5.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/dariah_topics-0.2.0.dev0.dist-info/WHEEL + nosetests --cover-html ..................... Name Stmts Miss Cover ---------------------------------------------------- dariah_topics/__init__.py 0 0 100% dariah_topics/doclist.py 93 6 94% dariah_topics/preprocessing.py 233 9 96% ---------------------------------------------------- TOTAL 326 15 95% ---------------------------------------------------------------------- Ran 21 tests in 6.272s OK Recording test results [Cobertura] Publishing Cobertura coverage report... Publishing Cobertura coverage results... Cobertura coverage report found. [Set GitHub commit status (universal)] SUCCESS on repos [GHRepository@15f0084a[description=A python library for topic modeling.,homepage=,name=Topics,license=<null>,fork=true,size=186614,milestones={},language=Jupyter Notebook,commits={},url=https://api.github.com/repos/DARIAH-DE/Topics,id=69341969]] (sha:f8669dd) with context:DARIAH-Topics Setting commit status on GitHub for https://github.com/DARIAH-DE/Topics/commit/f8669dd06e1c9db5d9623d63ccf29cbd3e1f892b Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds Notifying upstream projects of job completion [ci-game] evaluating rule: Build result [ci-game] scored: 1.0 [ci-game] evaluating rule: Increased number of passed tests [ci-game] evaluating rule: Decreased number of passed tests [ci-game] evaluating rule: Increased number of failed tests [ci-game] evaluating rule: Decreased number of failed tests [ci-game] evaluating rule: Increased number of skipped tests [ci-game] evaluating rule: Decreased number of skipped tests [ci-game] evaluating rule: Open HIGH priority tasks [ci-game] evaluating rule: Open NORMAL priority tasks [ci-game] evaluating rule: Open LOW priority tasks [ci-game] evaluating rule: Changed number of compiler warnings Finished: SUCCESS