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Started by GitHub push by severinsimmler
Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/DARIAH-Topics
 > /usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > /usr/bin/git config remote.origin.url git://github.com/DARIAH-DE/Topics # timeout=10
Fetching upstream changes from git://github.com/DARIAH-DE/Topics
 > /usr/bin/git --version # timeout=10
using GIT_ASKPASS to set credentials 
 > /usr/bin/git fetch --tags --progress git://github.com/DARIAH-DE/Topics +refs/heads/*:refs/remotes/origin/*
 > /usr/bin/git rev-parse refs/remotes/origin/testing^{commit} # timeout=10
 > /usr/bin/git rev-parse refs/remotes/origin/origin/testing^{commit} # timeout=10
Checking out Revision 4347853343589098ff6c625c6995eb6eba929c7e (refs/remotes/origin/testing)
 > /usr/bin/git config core.sparsecheckout # timeout=10
 > /usr/bin/git checkout -f 4347853343589098ff6c625c6995eb6eba929c7e
Commit message: "Fix typo"
 > /usr/bin/git rev-list --no-walk 9ef4ecbc53b14765d39c23c834edd238eae8f9de # timeout=10
[DARIAH-Topics] $ /usr/bin/python3 /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenv.py /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9
Using base prefix '/usr'
New python executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python3
Also creating executable in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/bin/python
Installing setuptools, pip, wheel...done.
[DARIAH-Topics] $ /bin/sh -xe /tmp/shiningpanda8321434678747810944.sh
+ pip install -U pip
Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages (10.0.1)
+ pip install -U -r requirements-dev.txt
Obtaining file:///mnt/data/jenkins/workspace/DARIAH-Topics (from -r requirements.txt (line 1))
Collecting pytest (from -r requirements-dev.txt (line 4))
  Using cached https://files.pythonhosted.org/packages/d3/75/e79b66c9fe6166a90004bb8fb02bab06213c3348e93f3be41d7eaf625554/pytest-3.6.1-py2.py3-none-any.whl
Collecting pytest-cov (from -r requirements-dev.txt (line 5))
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Collecting nbsmoke (from -r requirements-dev.txt (line 6))
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Collecting nbsphinx from git+https://github.com/spatialaudio/nbsphinx#egg=nbsphinx (from -r requirements-dev.txt (line 11))
  Cloning https://github.com/spatialaudio/nbsphinx to /tmp/pip-install-uxx68m66/nbsphinx
Collecting recommonmark (from -r requirements-dev.txt (line 12))
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Collecting pandas>=0.19.2 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
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Collecting regex>=2017.01.14 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
Collecting gensim>=0.13.2 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
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Collecting lda>=1.0.5 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
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Collecting lxml>=3.6.4 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
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Collecting matplotlib>=1.5.3 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
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Collecting bokeh>=0.12.6 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
Collecting metadata_toolbox (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
Collecting cophi_toolbox>=0.1.1.dev0 (from dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
  Downloading https://files.pythonhosted.org/packages/6d/ff/febc44a36adac4130f26d9252b5bbaa78df510841ffa04096e2d00d8cd38/cophi_toolbox-0.1.1.dev0.tar.gz
Collecting atomicwrites>=1.0 (from pytest->-r requirements-dev.txt (line 4))
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Collecting more-itertools>=4.0.0 (from pytest->-r requirements-dev.txt (line 4))
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Collecting pluggy<0.7,>=0.5 (from pytest->-r requirements-dev.txt (line 4))
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Requirement not upgraded as not directly required: setuptools in /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages (from pytest->-r requirements-dev.txt (line 4)) (39.2.0)
Collecting py>=1.5.0 (from pytest->-r requirements-dev.txt (line 4))
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Collecting attrs>=17.4.0 (from pytest->-r requirements-dev.txt (line 4))
  Using cached https://files.pythonhosted.org/packages/41/59/cedf87e91ed541be7957c501a92102f9cc6363c623a7666d69d51c78ac5b/attrs-18.1.0-py2.py3-none-any.whl
Collecting six>=1.10.0 (from pytest->-r requirements-dev.txt (line 4))
  Using cached https://files.pythonhosted.org/packages/67/4b/141a581104b1f6397bfa78ac9d43d8ad29a7ca43ea90a2d863fe3056e86a/six-1.11.0-py2.py3-none-any.whl
Collecting coverage>=3.7.1 (from pytest-cov->-r requirements-dev.txt (line 5))
  Using cached https://files.pythonhosted.org/packages/2c/c0/8047b7cbbcdbd7d21f8d68126196b7915da892c5af3d1a99dba082d33ec0/coverage-4.5.1-cp35-cp35m-manylinux1_x86_64.whl
Collecting pyflakes (from nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/44/98/af7a72c9a543b1487d92813c648cb9b9adfbc96faef5455d60f4439aa99b/pyflakes-2.0.0-py2.py3-none-any.whl
Collecting beautifulsoup4 (from nbsmoke->-r requirements-dev.txt (line 6))
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Collecting nbconvert (from nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/39/ea/280d6c0d92f8e3ca15fd798bbcc2ea141489f9539de7133d8fe10ea4b049/nbconvert-5.3.1-py2.py3-none-any.whl
Collecting ipykernel (from nbsmoke->-r requirements-dev.txt (line 6))
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Collecting requests (from nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/cc/15/e1c318dbc20032ffbe5628837ca0de2d5b116ffd1b849c699634010f6a5d/requests-2.19.0-py2.py3-none-any.whl
Collecting jupyter-client (from nbsmoke->-r requirements-dev.txt (line 6))
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Collecting nbformat (from nbsmoke->-r requirements-dev.txt (line 6))
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Collecting ipywidgets (from jupyter->-r requirements-dev.txt (line 9))
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Collecting jupyter-console (from jupyter->-r requirements-dev.txt (line 9))
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Collecting qtconsole (from jupyter->-r requirements-dev.txt (line 9))
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Collecting notebook (from jupyter->-r requirements-dev.txt (line 9))
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Collecting imagesize (from sphinx->-r requirements-dev.txt (line 10))
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Collecting babel!=2.0,>=1.3 (from sphinx->-r requirements-dev.txt (line 10))
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Collecting Jinja2>=2.3 (from sphinx->-r requirements-dev.txt (line 10))
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Collecting Pygments>=2.0 (from sphinx->-r requirements-dev.txt (line 10))
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  Using cached https://files.pythonhosted.org/packages/fa/bc/9bd3b5c2b4774d5f33b2d544f1460be9df7df2fe42f352135381c347c69a/ipython_genutils-0.2.0-py2.py3-none-any.whl
Collecting widgetsnbextension~=3.2.0 (from ipywidgets->jupyter->-r requirements-dev.txt (line 9))
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Collecting prompt-toolkit<2.0.0,>=1.0.0 (from jupyter-console->jupyter->-r requirements-dev.txt (line 9))
  Using cached https://files.pythonhosted.org/packages/04/d1/c6616dd03701e7e2073f06d5c3b41b012256e42b72561f16a7bd86dd7b43/prompt_toolkit-1.0.15-py3-none-any.whl
Collecting terminado>=0.8.1 (from notebook->jupyter->-r requirements-dev.txt (line 9))
  Using cached https://files.pythonhosted.org/packages/2e/20/a26211a24425923d46e1213b376a6ee60dc30bcdf1b0c345e2c3769deb1c/terminado-0.8.1-py2.py3-none-any.whl
Collecting Send2Trash (from notebook->jupyter->-r requirements-dev.txt (line 9))
  Using cached https://files.pythonhosted.org/packages/49/46/c3dc27481d1cc57b9385aff41c474ceb7714f7935b1247194adae45db714/Send2Trash-1.5.0-py3-none-any.whl
Collecting MarkupSafe>=0.23 (from Jinja2>=2.3->sphinx->-r requirements-dev.txt (line 10))
Collecting decorator (from traitlets->nbsphinx->-r requirements-dev.txt (line 11))
  Using cached https://files.pythonhosted.org/packages/bc/bb/a24838832ba35baf52f32ab1a49b906b5f82fb7c76b2f6a7e35e140bac30/decorator-4.3.0-py2.py3-none-any.whl
Collecting boto>=2.32 (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/bd/b7/a88a67002b1185ed9a8e8a6ef15266728c2361fcb4f1d02ea331e4c7741d/boto-2.48.0-py2.py3-none-any.whl
Collecting bz2file (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
Collecting boto3 (from smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/2f/e0/b9e3b23e100e0df42d3646e1d126a0f5e3d738921be142a2f0133ed502a5/boto3-1.7.37-py2.py3-none-any.whl
Collecting html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre (from bleach->nbconvert->nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/a5/62/bbd2be0e7943ec8504b517e62bab011b4946e1258842bc159e5dfde15b96/html5lib-1.0.1-py2.py3-none-any.whl
Collecting pickleshare (from ipython>=4.0.0->ipykernel->nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/9f/17/daa142fc9be6b76f26f24eeeb9a138940671490b91cb5587393f297c8317/pickleshare-0.7.4-py2.py3-none-any.whl
Collecting jedi>=0.10 (from ipython>=4.0.0->ipykernel->nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/e7/42/074192a165622e645ed4aeade63e76e56b3496a044569b3c6cae3a918352/jedi-0.12.0-py2.py3-none-any.whl
Collecting backcall (from ipython>=4.0.0->ipykernel->nbsmoke->-r requirements-dev.txt (line 6))
Collecting pexpect; sys_platform != "win32" (from ipython>=4.0.0->ipykernel->nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/89/e6/b5a1de8b0cc4e07ca1b305a4fcc3f9806025c1b651ea302646341222f88b/pexpect-4.6.0-py2.py3-none-any.whl
Collecting simplegeneric>0.8 (from ipython>=4.0.0->ipykernel->nbsmoke->-r requirements-dev.txt (line 6))
Collecting wcwidth (from prompt-toolkit<2.0.0,>=1.0.0->jupyter-console->jupyter->-r requirements-dev.txt (line 9))
  Using cached https://files.pythonhosted.org/packages/7e/9f/526a6947247599b084ee5232e4f9190a38f398d7300d866af3ab571a5bfe/wcwidth-0.1.7-py2.py3-none-any.whl
Collecting ptyprocess; os_name != "nt" (from terminado>=0.8.1->notebook->jupyter->-r requirements-dev.txt (line 9))
  Using cached https://files.pythonhosted.org/packages/ff/4e/fa4a73ccfefe2b37d7b6898329e7dbcd1ac846ba3a3b26b294a78a3eb997/ptyprocess-0.5.2-py2.py3-none-any.whl
Collecting jmespath<1.0.0,>=0.7.1 (from boto3->smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/b7/31/05c8d001f7f87f0f07289a5fc0fc3832e9a57f2dbd4d3b0fee70e0d51365/jmespath-0.9.3-py2.py3-none-any.whl
Collecting s3transfer<0.2.0,>=0.1.10 (from boto3->smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/d7/14/2a0004d487464d120c9fb85313a75cd3d71a7506955be458eebfe19a6b1d/s3transfer-0.1.13-py2.py3-none-any.whl
Collecting botocore<1.11.0,>=1.10.37 (from boto3->smart-open>=1.2.1->gensim>=0.13.2->dariah-topics==1.0.1.dev0->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/0b/97/60eba2ca866d346459bfb6f95ff5b2b611d7b1b844d0733acb436d59c893/botocore-1.10.37-py2.py3-none-any.whl
Collecting webencodings (from html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre->bleach->nbconvert->nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/f4/24/2a3e3df732393fed8b3ebf2ec078f05546de641fe1b667ee316ec1dcf3b7/webencodings-0.5.1-py2.py3-none-any.whl
Collecting parso>=0.2.0 (from jedi>=0.10->ipython>=4.0.0->ipykernel->nbsmoke->-r requirements-dev.txt (line 6))
  Using cached https://files.pythonhosted.org/packages/cd/3e/5908f9577dbd1e5df53e64349bfd11e46b726c1e4d8cd676bbe8aa4de316/parso-0.2.1-py2.py3-none-any.whl
Building wheels for collected packages: nbsphinx, cophi-toolbox
  Running setup.py bdist_wheel for nbsphinx: started
  Running setup.py bdist_wheel for nbsphinx: finished with status 'done'
  Stored in directory: /tmp/pip-ephem-wheel-cache-xx9j58cu/wheels/a3/7b/ff/b71160a2e088926eb13abcf8e0cde94c0aa8400c67d3df57f5
  Running setup.py bdist_wheel for cophi-toolbox: started
  Running setup.py bdist_wheel for cophi-toolbox: finished with status 'done'
  Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/3a/9f/7f/46dd4622d20c0d2cae2c330661079b576c5ff6e4b7c5093ee5
Successfully built nbsphinx cophi-toolbox
Installing collected packages: atomicwrites, six, more-itertools, pluggy, py, attrs, pytest, coverage, pytest-cov, pyflakes, beautifulsoup4, MarkupSafe, Jinja2, mistune, webencodings, html5lib, bleach, Pygments, ipython-genutils, decorator, traitlets, jupyter-core, pandocfilters, testpath, jsonschema, nbformat, entrypoints, nbconvert, pickleshare, wcwidth, prompt-toolkit, parso, jedi, backcall, ptyprocess, pexpect, simplegeneric, ipython, tornado, python-dateutil, pyzmq, jupyter-client, ipykernel, chardet, urllib3, certifi, idna, requests, nbsmoke, terminado, Send2Trash, notebook, widgetsnbextension, ipywidgets, jupyter-console, qtconsole, jupyter, imagesize, pytz, babel, pyparsing, packaging, snowballstemmer, docutils, sphinxcontrib-websupport, alabaster, sphinx, nbsphinx, commonmark, recommonmark, numpy, pandas, regex, boto, bz2file, jmespath, botocore, s3transfer, boto3, smart-open, scipy, gensim, pbr, lda, lxml, cycler, kiwisolver, matplotlib, PyYAML, bokeh, parse, metadata-toolbox, cophi-toolbox, dariah-topics
  Running setup.py develop for dariah-topics
Successfully installed Jinja2-2.10 MarkupSafe-1.0 PyYAML-3.12 Pygments-2.2.0 Send2Trash-1.5.0 alabaster-0.7.10 atomicwrites-1.1.5 attrs-18.1.0 babel-2.6.0 backcall-0.1.0 beautifulsoup4-4.6.0 bleach-2.1.3 bokeh-0.12.16 boto-2.48.0 boto3-1.7.37 botocore-1.10.37 bz2file-0.98 certifi-2018.4.16 chardet-3.0.4 commonmark-0.5.4 cophi-toolbox-0.1.1.dev0 coverage-4.5.1 cycler-0.10.0 dariah-topics decorator-4.3.0 docutils-0.14 entrypoints-0.2.3 gensim-3.4.0 html5lib-1.0.1 idna-2.7 imagesize-1.0.0 ipykernel-4.8.2 ipython-6.4.0 ipython-genutils-0.2.0 ipywidgets-7.2.1 jedi-0.12.0 jmespath-0.9.3 jsonschema-2.6.0 jupyter-1.0.0 jupyter-client-5.2.3 jupyter-console-5.2.0 jupyter-core-4.4.0 kiwisolver-1.0.1 lda-1.0.5 lxml-4.2.1 matplotlib-2.2.2 metadata-toolbox-0.1.0.dev0 mistune-0.8.3 more-itertools-4.2.0 nbconvert-5.3.1 nbformat-4.4.0 nbsmoke-0.2.7 nbsphinx-0.3.3 notebook-5.5.0 numpy-1.14.5 packaging-17.1 pandas-0.23.1 pandocfilters-1.4.2 parse-1.8.4 parso-0.2.1 pbr-4.0.4 pexpect-4.6.0 pickleshare-0.7.4 pluggy-0.6.0 prompt-toolkit-1.0.15 ptyprocess-0.5.2 py-1.5.3 pyflakes-2.0.0 pyparsing-2.2.0 pytest-3.6.1 pytest-cov-2.5.1 python-dateutil-2.7.3 pytz-2018.4 pyzmq-17.0.0 qtconsole-4.3.1 recommonmark-0.4.0 regex-2018.6.9 requests-2.19.0 s3transfer-0.1.13 scipy-1.1.0 simplegeneric-0.8.1 six-1.11.0 smart-open-1.5.7 snowballstemmer-1.2.1 sphinx-1.7.5 sphinxcontrib-websupport-1.1.0 terminado-0.8.1 testpath-0.3.1 tornado-5.0.2 traitlets-4.3.2 urllib3-1.23 wcwidth-0.1.7 webencodings-0.5.1 widgetsnbextension-3.2.1
+ ./setup.py sdist bdist_wheel
running sdist
running egg_info
writing dariah_topics.egg-info/PKG-INFO
writing requirements to dariah_topics.egg-info/requires.txt
writing dependency_links to dariah_topics.egg-info/dependency_links.txt
writing top-level names to dariah_topics.egg-info/top_level.txt
reading manifest file 'dariah_topics.egg-info/SOURCES.txt'
writing manifest file 'dariah_topics.egg-info/SOURCES.txt'
running check
creating dariah_topics-1.0.1.dev0
creating dariah_topics-1.0.1.dev0/dariah_topics
creating dariah_topics-1.0.1.dev0/dariah_topics.egg-info
creating dariah_topics-1.0.1.dev0/test
copying files to dariah_topics-1.0.1.dev0...
copying README.md -> dariah_topics-1.0.1.dev0
copying setup.cfg -> dariah_topics-1.0.1.dev0
copying setup.py -> dariah_topics-1.0.1.dev0
copying dariah_topics/__init__.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics/evaluation.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics/modeling.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics/postprocessing.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics/preprocessing.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics/utils.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics/visualization.py -> dariah_topics-1.0.1.dev0/dariah_topics
copying dariah_topics.egg-info/PKG-INFO -> dariah_topics-1.0.1.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/SOURCES.txt -> dariah_topics-1.0.1.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/dependency_links.txt -> dariah_topics-1.0.1.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/requires.txt -> dariah_topics-1.0.1.dev0/dariah_topics.egg-info
copying dariah_topics.egg-info/top_level.txt -> dariah_topics-1.0.1.dev0/dariah_topics.egg-info
copying test/test_fuzzy_segmenting.py -> dariah_topics-1.0.1.dev0/test
Writing dariah_topics-1.0.1.dev0/setup.cfg
Creating tar archive
removing 'dariah_topics-1.0.1.dev0' (and everything under it)
running bdist_wheel
running build
running build_py
copying dariah_topics/visualization.py -> build/lib/dariah_topics
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/modeling.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/preprocessing.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/utils.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/postprocessing.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/evaluation.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/__init__.py -> build/bdist.linux-x86_64/wheel/dariah_topics
copying build/lib/dariah_topics/visualization.py -> build/bdist.linux-x86_64/wheel/dariah_topics
running install_egg_info
Copying dariah_topics.egg-info to build/bdist.linux-x86_64/wheel/dariah_topics-1.0.1.dev0-py3.5.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/dariah_topics-1.0.1.dev0.dist-info/WHEEL
creating '/mnt/data/jenkins/workspace/DARIAH-Topics/dist/dariah_topics-1.0.1.dev0-py3-none-any.whl' and adding '.' to it
adding 'dariah_topics/__init__.py'
adding 'dariah_topics/evaluation.py'
adding 'dariah_topics/modeling.py'
adding 'dariah_topics/postprocessing.py'
adding 'dariah_topics/preprocessing.py'
adding 'dariah_topics/utils.py'
adding 'dariah_topics/visualization.py'
adding 'dariah_topics-1.0.1.dev0.dist-info/top_level.txt'
adding 'dariah_topics-1.0.1.dev0.dist-info/WHEEL'
adding 'dariah_topics-1.0.1.dev0.dist-info/METADATA'
adding 'dariah_topics-1.0.1.dev0.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
/mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/setuptools/dist.py:398: UserWarning: Normalizing '1.0.1.dev' to '1.0.1.dev0'
  normalized_version,
+ pytest --nbsmoke-run
============================= test session starts ==============================
platform linux -- Python 3.5.3, pytest-3.6.1, py-1.5.3, pluggy-0.6.0
rootdir: /mnt/data/jenkins/workspace/DARIAH-Topics, inifile: setup.cfg
plugins: cov-2.5.1, nbsmoke-0.2.7
collected 57 items

dariah_topics/postprocessing.py ........F..                              [ 19%]
dariah_topics/preprocessing.py ...........................               [ 66%]
dariah_topics/utils.py ......                                            [ 77%]
notebooks/IntroducingGensim.ipynb .                                      [ 78%]
notebooks/IntroducingLda.ipynb .                                         [ 80%]
notebooks/IntroducingMallet.ipynb .                                      [ 82%]
notebooks/Visualizations.ipynb .                                         [ 84%]
test/test_fuzzy_segmenting.py .........                                  [100%]

=================================== FAILURES ===================================
______________ [doctest] dariah_topics.postprocessing.save_model _______________
157 
158     Returns:
159         None.
160 
161     Example:
162         >>> from lda import LDA
163         >>> from gensim.models import LdaModel
164         >>> from cophi_toolbox import preprocessing
165         >>> save_model(LDA, 'model.pickle')
166         >>> preprocessing.read_model('model.pickle') == LDA
UNEXPECTED EXCEPTION: AttributeError("module 'cophi_toolbox.preprocessing' has no attribute 'read_model'",)
Traceback (most recent call last):

  File "/usr/lib/python3.5/doctest.py", line 1321, in __run
    compileflags, 1), test.globs)

  File "<doctest dariah_topics.postprocessing.save_model[4]>", line 1, in <module>

AttributeError: module 'cophi_toolbox.preprocessing' has no attribute 'read_model'

/mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/postprocessing.py:166: UnexpectedException
--- generated xml file: /mnt/data/jenkins/workspace/DARIAH-Topics/tests.xml ----

----------- coverage: platform linux, python 3.5.3-final-0 -----------
Coverage HTML written to dir htmlcov
Coverage XML written to file coverage.xml

=============================== warnings summary ===============================
dariah_topics/postprocessing.py::dariah_topics.postprocessing._show_lda_document_topics
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/postprocessing.py:1: FutureWarning: Method .as_matrix will be removed in a future version. Use .values instead.
    """

dariah_topics/postprocessing.py::dariah_topics.postprocessing._show_lda_topics
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/postprocessing.py:1: FutureWarning: Method .as_matrix will be removed in a future version. Use .values instead.
    """

dariah_topics/postprocessing.py::dariah_topics.postprocessing.doc2bow
  /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/cophi_toolbox/preprocessing.py:625: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/postprocessing.py::dariah_topics.postprocessing.save_document_term_matrix
  /mnt/data/jenkins/shiningpanda/jobs/62c67c92/virtualenvs/d41d8cd9/lib/python3.5/site-packages/cophi_toolbox/preprocessing.py:625: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing._create_large_corpus_model
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing._hapax_legomena_large_corpus_model
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing._list_mfw_large_corpus_model
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing._remove_features_from_large_corpus_model
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing.create_document_term_matrix
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing.find_hapax_legomena
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing.list_mfw
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

dariah_topics/preprocessing.py::dariah_topics.preprocessing.remove_features
  /mnt/data/jenkins/workspace/DARIAH-Topics/dariah_topics/preprocessing.py:732: FutureWarning: set_value is deprecated and will be removed in a future release. Please use .at[] or .iat[] accessors instead
    document_term_matrix.set_value((document_id, type_id), 0, int(bag_of_words[document_id][type_id]))

-- Docs: http://doc.pytest.org/en/latest/warnings.html
============== 1 failed, 56 passed, 12 warnings in 79.40 seconds ===============
Build step 'Virtualenv Builder' marked build as failure
Recording test results
[Cobertura] Publishing Cobertura coverage report...

[Cobertura] Publishing Cobertura coverage results...

[Cobertura] Cobertura coverage report found.

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Setting commit status on GitHub for https://github.com/DARIAH-DE/Topics/commit/4347853343589098ff6c625c6995eb6eba929c7e
[BFA] Scanning build for known causes...
[BFA] No failure causes found
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Notifying upstream projects of job completion
[ci-game] evaluating rule: Build result
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[ci-game] evaluating rule: Decreased number of failed tests
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Finished: FAILURE