Console Output
Started by GitHub push by thvitt
Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/pydelta-next
Cloning the remote Git repository
Cloning repository https://github.com/cophi-wue/pydelta
> git init /mnt/data/jenkins/workspace/pydelta-next # timeout=10
Fetching upstream changes from https://github.com/cophi-wue/pydelta
> git --version # timeout=10
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/*
> git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10
Fetching upstream changes from https://github.com/cophi-wue/pydelta
using GIT_ASKPASS to set credentials
> git fetch --tags --progress https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/*
> git rev-parse refs/remotes/origin/next^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/next^{commit} # timeout=10
Checking out Revision f07331328a302cdbb866b01a29c4361bcc5a17c9 (refs/remotes/origin/next)
> git config core.sparsecheckout # timeout=10
> git checkout -f f07331328a302cdbb866b01a29c4361bcc5a17c9
Commit message: "The KMedoids warning doesn't need exception info"
> git rev-list f9e12b0d0e32d49c66dee735fea09bae284f0f84 # timeout=10
No emails were triggered.
[pydelta-next] $ /bin/sh -xe /tmp/shiningpanda8288498962007368448.sh
+ pip install -U pip
Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
+ pip install -U numpy scipy Cython
Collecting numpy
Using cached numpy-1.14.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting scipy
Using cached scipy-1.0.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting Cython
Downloading Cython-0.27.3-cp35-cp35m-manylinux1_x86_64.whl (3.0MB)
Installing collected packages: numpy, scipy, Cython
Found existing installation: numpy 1.12.1
Uninstalling numpy-1.12.1:
Successfully uninstalled numpy-1.12.1
Found existing installation: scipy 0.19.0
Uninstalling scipy-0.19.0:
Successfully uninstalled scipy-0.19.0
Found existing installation: Cython 0.25.2
Uninstalling Cython-0.25.2:
Successfully uninstalled Cython-0.25.2
Successfully installed Cython-0.27.3 numpy-1.14.0 scipy-1.0.0
+ pip install -U -r requirements.txt
Obtaining file:///mnt/data/jenkins/workspace/pydelta-next (from -r requirements.txt (line 1))
Requirement already up-to-date: Cython in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 3))
Requirement already up-to-date: nose in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 8))
Requirement already up-to-date: nose-progressive in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 9))
Requirement already up-to-date: nosexcover in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 10))
Collecting Sphinx (from -r requirements.txt (line 11))
Using cached Sphinx-1.6.6-py2.py3-none-any.whl
Collecting ipykernel (from -r requirements.txt (line 12))
Using cached ipykernel-4.8.0-py3-none-any.whl
Collecting nbsphinx (from -r requirements.txt (line 13))
Downloading nbsphinx-0.3.1-py2.py3-none-any.whl
Requirement already up-to-date: scipy>=0.14.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Collecting matplotlib>=1.3.1 (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Using cached matplotlib-2.1.2-cp35-cp35m-manylinux1_x86_64.whl
Requirement already up-to-date: numpy>=1.8.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Collecting pandas>=0.13.1 (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Using cached pandas-0.22.0-cp35-cp35m-manylinux1_x86_64.whl
Collecting scikit-learn>=0.16.0 (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Downloading scikit_learn-0.19.1-cp35-cp35m-manylinux1_x86_64.whl (12.2MB)
Collecting regex (from delta==2.0.0.dev1->-r requirements.txt (line 1))
Collecting blessings<2.0,>=1.3 (from nose-progressive->-r requirements.txt (line 9))
Downloading blessings-1.6.1-py3-none-any.whl
Collecting coverage>=3.4 (from nosexcover->-r requirements.txt (line 10))
Using cached coverage-4.4.2-cp35-cp35m-manylinux1_x86_64.whl
Requirement already up-to-date: snowballstemmer>=1.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 11))
Collecting babel!=2.0,>=1.3 (from Sphinx->-r requirements.txt (line 11))
Using cached Babel-2.5.3-py2.py3-none-any.whl
Collecting docutils>=0.11 (from Sphinx->-r requirements.txt (line 11))
Using cached docutils-0.14-py3-none-any.whl
Collecting Jinja2>=2.3 (from Sphinx->-r requirements.txt (line 11))
Using cached Jinja2-2.10-py2.py3-none-any.whl
Requirement already up-to-date: Pygments>=2.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 11))
Requirement already up-to-date: alabaster<0.8,>=0.7 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 11))
Requirement already up-to-date: imagesize in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 11))
Collecting sphinxcontrib-websupport (from Sphinx->-r requirements.txt (line 11))
Using cached sphinxcontrib_websupport-1.0.1-py2.py3-none-any.whl
Collecting requests>=2.0.0 (from Sphinx->-r requirements.txt (line 11))
Using cached requests-2.18.4-py2.py3-none-any.whl
Collecting six>=1.5 (from Sphinx->-r requirements.txt (line 11))
Using cached six-1.11.0-py2.py3-none-any.whl
Collecting setuptools (from Sphinx->-r requirements.txt (line 11))
Using cached setuptools-38.4.0-py2.py3-none-any.whl
Requirement already up-to-date: traitlets>=4.1.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipykernel->-r requirements.txt (line 12))
Collecting jupyter-client (from ipykernel->-r requirements.txt (line 12))
Downloading jupyter_client-5.2.2-py2.py3-none-any.whl (88kB)
Collecting ipython>=4.0.0 (from ipykernel->-r requirements.txt (line 12))
Using cached ipython-6.2.1-py3-none-any.whl
Collecting tornado>=4.0 (from ipykernel->-r requirements.txt (line 12))
Collecting nbconvert (from nbsphinx->-r requirements.txt (line 13))
Using cached nbconvert-5.3.1-py2.py3-none-any.whl
Collecting nbformat (from nbsphinx->-r requirements.txt (line 13))
Using cached nbformat-4.4.0-py2.py3-none-any.whl
Collecting python-dateutil>=2.1 (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Using cached python_dateutil-2.6.1-py2.py3-none-any.whl
Requirement already up-to-date: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Requirement already up-to-date: cycler>=0.10 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Collecting pytz (from matplotlib>=1.3.1->delta==2.0.0.dev1->-r requirements.txt (line 1))
Using cached pytz-2017.3-py2.py3-none-any.whl
Requirement already up-to-date: MarkupSafe>=0.23 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Jinja2>=2.3->Sphinx->-r requirements.txt (line 11))
Collecting certifi>=2017.4.17 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 11))
Using cached certifi-2018.1.18-py2.py3-none-any.whl
Collecting urllib3<1.23,>=1.21.1 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 11))
Using cached urllib3-1.22-py2.py3-none-any.whl
Collecting idna<2.7,>=2.5 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 11))
Using cached idna-2.6-py2.py3-none-any.whl
Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.0.0->Sphinx->-r requirements.txt (line 11))
Using cached chardet-3.0.4-py2.py3-none-any.whl
Collecting decorator (from traitlets>=4.1.0->ipykernel->-r requirements.txt (line 12))
Using cached decorator-4.2.1-py2.py3-none-any.whl
Requirement already up-to-date: ipython-genutils in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from traitlets>=4.1.0->ipykernel->-r requirements.txt (line 12))
Collecting jupyter-core (from jupyter-client->ipykernel->-r requirements.txt (line 12))
Using cached jupyter_core-4.4.0-py2.py3-none-any.whl
Collecting pyzmq>=13 (from jupyter-client->ipykernel->-r requirements.txt (line 12))
Downloading pyzmq-16.0.4-cp35-cp35m-manylinux1_x86_64.whl (3.1MB)
Requirement already up-to-date: simplegeneric>0.8 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Collecting prompt-toolkit<2.0.0,>=1.0.4 (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Using cached prompt_toolkit-1.0.15-py3-none-any.whl
Collecting pexpect; sys_platform != "win32" (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Using cached pexpect-4.3.1-py2.py3-none-any.whl
Collecting jedi>=0.10 (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Using cached jedi-0.11.1-py2.py3-none-any.whl
Requirement already up-to-date: pickleshare in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Collecting entrypoints>=0.2.2 (from nbconvert->nbsphinx->-r requirements.txt (line 13))
Using cached entrypoints-0.2.3-py2.py3-none-any.whl
Collecting bleach (from nbconvert->nbsphinx->-r requirements.txt (line 13))
Using cached bleach-2.1.2-py2.py3-none-any.whl
Collecting testpath (from nbconvert->nbsphinx->-r requirements.txt (line 13))
Using cached testpath-0.3.1-py2.py3-none-any.whl
Collecting pandocfilters>=1.4.1 (from nbconvert->nbsphinx->-r requirements.txt (line 13))
Collecting mistune>=0.7.4 (from nbconvert->nbsphinx->-r requirements.txt (line 13))
Using cached mistune-0.8.3-py2.py3-none-any.whl
Requirement already up-to-date: jsonschema!=2.5.0,>=2.4 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from nbformat->nbsphinx->-r requirements.txt (line 13))
Requirement already up-to-date: wcwidth in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from prompt-toolkit<2.0.0,>=1.0.4->ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Collecting ptyprocess>=0.5 (from pexpect; sys_platform != "win32"->ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Using cached ptyprocess-0.5.2-py2.py3-none-any.whl
Collecting parso==0.1.1 (from jedi>=0.10->ipython>=4.0.0->ipykernel->-r requirements.txt (line 12))
Using cached parso-0.1.1-py2.py3-none-any.whl
Collecting html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre (from bleach->nbconvert->nbsphinx->-r requirements.txt (line 13))
Using cached html5lib-1.0.1-py2.py3-none-any.whl
Requirement already up-to-date: webencodings in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre->bleach->nbconvert->nbsphinx->-r requirements.txt (line 13))
Installing collected packages: pytz, babel, docutils, Jinja2, sphinxcontrib-websupport, certifi, urllib3, idna, chardet, requests, six, setuptools, Sphinx, jupyter-core, python-dateutil, tornado, pyzmq, jupyter-client, prompt-toolkit, decorator, ptyprocess, pexpect, parso, jedi, ipython, ipykernel, entrypoints, html5lib, bleach, nbformat, testpath, pandocfilters, mistune, nbconvert, nbsphinx, matplotlib, pandas, scikit-learn, regex, delta, blessings, coverage
Found existing installation: pytz 2017.2
Uninstalling pytz-2017.2:
Successfully uninstalled pytz-2017.2
Found existing installation: Babel 2.4.0
Uninstalling Babel-2.4.0:
Successfully uninstalled Babel-2.4.0
Found existing installation: docutils 0.13.1
Uninstalling docutils-0.13.1:
Successfully uninstalled docutils-0.13.1
Found existing installation: Jinja2 2.9.6
Uninstalling Jinja2-2.9.6:
Successfully uninstalled Jinja2-2.9.6
Found existing installation: requests 2.13.0
Uninstalling requests-2.13.0:
Successfully uninstalled requests-2.13.0
Found existing installation: six 1.10.0
Uninstalling six-1.10.0:
Successfully uninstalled six-1.10.0
Found existing installation: setuptools 35.0.1
Uninstalling setuptools-35.0.1:
Successfully uninstalled setuptools-35.0.1
Found existing installation: Sphinx 1.5.5
Uninstalling Sphinx-1.5.5:
Successfully uninstalled Sphinx-1.5.5
Found existing installation: jupyter-core 4.3.0
Uninstalling jupyter-core-4.3.0:
Successfully uninstalled jupyter-core-4.3.0
Found existing installation: python-dateutil 2.6.0
Uninstalling python-dateutil-2.6.0:
Successfully uninstalled python-dateutil-2.6.0
Found existing installation: tornado 4.5
Uninstalling tornado-4.5:
Successfully uninstalled tornado-4.5
Found existing installation: pyzmq 16.0.2
Uninstalling pyzmq-16.0.2:
Successfully uninstalled pyzmq-16.0.2
Found existing installation: jupyter-client 5.0.1
Uninstalling jupyter-client-5.0.1:
Successfully uninstalled jupyter-client-5.0.1
Found existing installation: prompt-toolkit 1.0.14
Uninstalling prompt-toolkit-1.0.14:
Successfully uninstalled prompt-toolkit-1.0.14
Found existing installation: decorator 4.0.11
Uninstalling decorator-4.0.11:
Successfully uninstalled decorator-4.0.11
Found existing installation: ptyprocess 0.5.1
Uninstalling ptyprocess-0.5.1:
Successfully uninstalled ptyprocess-0.5.1
Found existing installation: pexpect 4.2.1
Uninstalling pexpect-4.2.1:
Successfully uninstalled pexpect-4.2.1
Found existing installation: ipython 5.3.0
Uninstalling ipython-5.3.0:
Successfully uninstalled ipython-5.3.0
Found existing installation: ipykernel 4.6.1
Uninstalling ipykernel-4.6.1:
Successfully uninstalled ipykernel-4.6.1
Found existing installation: entrypoints 0.2.2
Uninstalling entrypoints-0.2.2:
Successfully uninstalled entrypoints-0.2.2
Found existing installation: html5lib 0.999999999
Uninstalling html5lib-0.999999999:
Successfully uninstalled html5lib-0.999999999
Found existing installation: bleach 2.0.0
Uninstalling bleach-2.0.0:
Successfully uninstalled bleach-2.0.0
Found existing installation: nbformat 4.3.0
Uninstalling nbformat-4.3.0:
Successfully uninstalled nbformat-4.3.0
Found existing installation: testpath 0.3
Uninstalling testpath-0.3:
Successfully uninstalled testpath-0.3
Found existing installation: pandocfilters 1.4.1
Uninstalling pandocfilters-1.4.1:
Successfully uninstalled pandocfilters-1.4.1
Found existing installation: mistune 0.7.4
Uninstalling mistune-0.7.4:
Successfully uninstalled mistune-0.7.4
Found existing installation: nbconvert 5.1.1
Uninstalling nbconvert-5.1.1:
Successfully uninstalled nbconvert-5.1.1
Found existing installation: nbsphinx 0.2.13
Uninstalling nbsphinx-0.2.13:
Successfully uninstalled nbsphinx-0.2.13
Found existing installation: matplotlib 2.0.0
Uninstalling matplotlib-2.0.0:
Successfully uninstalled matplotlib-2.0.0
Found existing installation: pandas 0.19.2
Uninstalling pandas-0.19.2:
Successfully uninstalled pandas-0.19.2
Found existing installation: scikit-learn 0.19.dev0
Uninstalling scikit-learn-0.19.dev0:
Successfully uninstalled scikit-learn-0.19.dev0
Found existing installation: regex 2017.4.5
Uninstalling regex-2017.4.5:
Successfully uninstalled regex-2017.4.5
Found existing installation: delta 2.0.0.dev1
Uninstalling delta-2.0.0.dev1:
Successfully uninstalled delta-2.0.0.dev1
Running setup.py develop for delta
Found existing installation: blessings 1.6
Uninstalling blessings-1.6:
Successfully uninstalled blessings-1.6
Found existing installation: coverage 4.3.4
Uninstalling coverage-4.3.4:
Successfully uninstalled coverage-4.3.4
Successfully installed Jinja2-2.10 Sphinx-1.6.6 babel-2.5.3 bleach-2.1.2 blessings-1.6.1 certifi-2018.1.18 chardet-3.0.4 coverage-4.4.2 decorator-4.2.1 delta docutils-0.14 entrypoints-0.2.3 html5lib-1.0.1 idna-2.6 ipykernel-4.8.0 ipython-6.2.1 jedi-0.11.1 jupyter-client-5.2.2 jupyter-core-4.4.0 matplotlib-2.1.2 mistune-0.8.3 nbconvert-5.3.1 nbformat-4.4.0 nbsphinx-0.3.1 pandas-0.22.0 pandocfilters-1.4.2 parso-0.1.1 pexpect-4.3.1 prompt-toolkit-1.0.15 ptyprocess-0.5.2 python-dateutil-2.6.1 pytz-2017.3 pyzmq-16.0.4 regex-2018.1.10 requests-2.18.4 scikit-learn-0.19.1 setuptools-38.4.0 six-1.11.0 sphinxcontrib-websupport-1.0.1 testpath-0.3.1 tornado-4.5.3 urllib3-1.22
+ ./setup.py sdist bdist
running sdist
running egg_info
writing top-level names to delta.egg-info/top_level.txt
writing requirements to delta.egg-info/requires.txt
writing delta.egg-info/PKG-INFO
writing dependency_links to delta.egg-info/dependency_links.txt
reading manifest file 'delta.egg-info/SOURCES.txt'
writing manifest file 'delta.egg-info/SOURCES.txt'
running check
warning: check: missing required meta-data: url
warning: check: missing meta-data: if 'author' supplied, 'author_email' must be supplied too
creating delta-2.0.0.dev1
creating delta-2.0.0.dev1/delta
creating delta-2.0.0.dev1/delta.egg-info
copying files to delta-2.0.0.dev1...
copying README.rst -> delta-2.0.0.dev1
copying setup.cfg -> delta-2.0.0.dev1
copying setup.py -> delta-2.0.0.dev1
copying delta/__init__.py -> delta-2.0.0.dev1/delta
copying delta/cluster.py -> delta-2.0.0.dev1/delta
copying delta/corpus.py -> delta-2.0.0.dev1/delta
copying delta/deltas.py -> delta-2.0.0.dev1/delta
copying delta/experiments.py -> delta-2.0.0.dev1/delta
copying delta/features.py -> delta-2.0.0.dev1/delta
copying delta/graphics.py -> delta-2.0.0.dev1/delta
copying delta/util.py -> delta-2.0.0.dev1/delta
copying delta.egg-info/PKG-INFO -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/SOURCES.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/dependency_links.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/requires.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/top_level.txt -> delta-2.0.0.dev1/delta.egg-info
Writing delta-2.0.0.dev1/setup.cfg
creating dist
Creating tar archive
removing 'delta-2.0.0.dev1' (and everything under it)
running bdist
running bdist_dumb
running build
running build_py
creating build
creating build/lib
creating build/lib/delta
copying delta/features.py -> build/lib/delta
copying delta/graphics.py -> build/lib/delta
copying delta/experiments.py -> build/lib/delta
copying delta/corpus.py -> build/lib/delta
copying delta/cluster.py -> build/lib/delta
copying delta/util.py -> build/lib/delta
copying delta/deltas.py -> build/lib/delta
copying delta/__init__.py -> build/lib/delta
installing to build/bdist.linux-x86_64/dumb
running install
running install_lib
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/dumb
creating build/bdist.linux-x86_64/dumb/mnt
creating build/bdist.linux-x86_64/dumb/mnt/data
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/features.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/graphics.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/experiments.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/corpus.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/cluster.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/util.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/deltas.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/__init__.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/features.py to features.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/graphics.py to graphics.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/experiments.py to experiments.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/corpus.py to corpus.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/cluster.py to cluster.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/util.py to util.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/deltas.py to deltas.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/__init__.py to __init__.cpython-35.pyc
running install_egg_info
Copying delta.egg-info to build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta-2.0.0.dev1-py3.5.egg-info
running install_scripts
Creating tar archive
removing 'build/bdist.linux-x86_64/dumb' (and everything under it)
+ ./setup.py build_sphinx
running build_sphinx
creating /mnt/data/jenkins/workspace/pydelta-next/build/sphinx
creating /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/doctrees
creating /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html
Running Sphinx v1.6.6
loading pickled environment... not yet created
loading intersphinx inventory from http://pandas.pydata.org/pandas-docs/stable/objects.inv...
loading intersphinx inventory from http://docs.python.org/objects.inv...
intersphinx inventory has moved: http://docs.python.org/objects.inv -> https://docs.python.org/2/objects.inv
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 9 source files that are out of date
updating environment: 9 added, 0 changed, 0 removed
reading sources... [ 11%] CustomizingPipeline
reading sources... [ 22%] GettingStarted
reading sources... [ 33%] README
reading sources... [ 44%] README-branch
reading sources... [ 55%] concept
reading sources... [ 66%] delta
KMedoids clustering not available.
You need a patched scikit-learn, see README.txt
reading sources... [ 77%] index
reading sources... [ 88%] modules
reading sources... [100%] refactoring-notes
/mnt/data/jenkins/workspace/pydelta-next/delta/__init__.py:35: UserWarning: KMedoidsClustering not available
warn("KMedoidsClustering not available")
/mnt/data/jenkins/workspace/pydelta-next/docs/CustomizingPipeline.ipynb:2368: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:67: WARNING: Unknown interpreted text role "function".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.tokenize:3: WARNING: Unknown interpreted text role "param".
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.distance:8: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.iterate_distance:12: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/graphics.py:docstring of delta.graphics.Dendrogram:33: WARNING: Unknown interpreted text role "module".
/mnt/data/jenkins/workspace/pydelta-next/docs/delta.rst:59: WARNING: __all__ should be a list of strings, not [<class 'delta.corpus.Corpus'>, <class 'delta.corpus.FeatureGenerator'>, regex.Regex('\\p{L}+', flags=regex.V0), regex.Regex("\\b(\\p{L}[\\p{L}'’]*?|[\\p{L}'’]*?\\p{L})\\b", flags=regex.V0 | regex.W), <delta.deltas._FunctionRegistry object at 0x7fec6a714f98>, <class 'delta.deltas.Normalization'>, <function normalization at 0x7fec6d412378>, <class 'delta.deltas.DeltaFunction'>, <class 'delta.deltas.PDistDeltaFunction'>, <class 'delta.deltas.MetricDeltaFunction'>, <class 'delta.deltas.CompositeDeltaFunction'>, <class 'delta.cluster.Clustering'>, <class 'delta.cluster.FlatClustering'>, <function get_rfe_features at 0x7fec65037840>, <class 'delta.graphics.Dendrogram'>] (in module delta) -- ignoring __all__
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:9: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:12: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... done
checking consistency... /mnt/data/jenkins/workspace/pydelta-next/docs/README-branch.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/modules.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 11%] CustomizingPipeline
writing output... [ 22%] GettingStarted
writing output... [ 33%] README
writing output... [ 44%] README-branch
writing output... [ 55%] concept
writing output... [ 66%] delta
writing output... [ 77%] index
writing output... [ 88%] modules
writing output... [100%] refactoring-notes
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:40: WARNING: undefined label: /delta.html#delta.corpus.corpus (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:293: WARNING: undefined label: /delta.html#corpus.corpus.relative_frequencies (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:293: WARNING: 'any' reference target not found: the :math:`n
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:293: WARNING: undefined label: /delta.html#corpus.corpus.get_mfw_table (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:320: WARNING: undefined label: /delta.html#deltas.distancematrix (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:481: WARNING: undefined label: /delta.rst#cluster.clustering (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:500: WARNING: undefined label: /delta.html#graph.dendrogram (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:500: WARNING: undefined label: /delta.html#corpus.documentdescriber (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:661: WARNING: undefined label: /delta.rst#cluster.flatclustering (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:31: WARNING: 'any' reference target not found: sort
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:32: WARNING: 'any' reference target not found: reparse_column
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:33: WARNING: 'any' reference target not found: relativize
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:36: WARNING: 'any' reference target not found: normalize
/mnt/data/jenkins/workspace/pydelta-next/docs/delta.rst:16: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.postprocess_tokens:4: WARNING: 'any' reference target not found: lower_case
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.count_tokens:1: WARNING: 'any' reference target not found: lines
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.process_file:3: WARNING: 'any' reference target not found: filename
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.new_data:1: WARNING: 'any' reference target not found: DataFrame
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.get_mfw_table:: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.top_n:: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction:: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.MetricDeltaFunction:18: WARNING: 'any' reference target not found: fix_symmetry
generating indices... genindex py-modindex
highlighting module code... [ 20%] delta.cluster
highlighting module code... [ 40%] delta.util
highlighting module code... [ 60%] delta.graphics
highlighting module code... [ 80%] delta.corpus
highlighting module code... [100%] delta.deltas
writing additional pages... search
copying images... [ 33%] ../build/sphinx/doctrees/nbsphinx/CustomizingPipeline_11_0.png
copying images... [ 66%] ../build/sphinx/doctrees/nbsphinx/GettingStarted_22_0.png
copying images... [100%] ../build/sphinx/doctrees/nbsphinx/CustomizingPipeline_22_0.png
copying static files... WARNING: html_static_path entry '/mnt/data/jenkins/workspace/pydelta-next/docs/_static' does not exist
done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 37 warnings.
+ nosetests
/mnt/data/jenkins/workspace/pydelta-next/delta/__init__.py:35: UserWarning: KMedoidsClustering not available
warn("KMedoidsClustering not available")
.../mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:323: UserWarning: Pandas doesn't allow columns to be created via a new attribute name - see https://pandas.pydata.org/pandas-docs/stable/indexing.html#attribute-access
self.metadata = metadata
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:627: UserWarning: Pandas doesn't allow columns to be created via a new attribute name - see https://pandas.pydata.org/pandas-docs/stable/indexing.html#attribute-access
self.metadata = Metadata(metadata, **kwargs)
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:622: UserWarning: Pandas doesn't allow columns to be created via a new attribute name - see https://pandas.pydata.org/pandas-docs/stable/indexing.html#attribute-access
self.metadata = copy_from.metadata
........./mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/pandas/io/parsers.py:449: ParserWarning: Conflicting values for 'delimiter': ' ' was provided, but the dialect specifies ','. Using the dialect-specified value.
parser = TextFileReader(filepath_or_buffer, **kwds)
.......
Name Stmts Miss Cover
------------------------------------------
delta/__init__.py 16 1 94%
delta/cluster.py 116 24 79%
delta/corpus.py 187 67 64%
delta/deltas.py 363 136 63%
delta/experiments.py 2 0 100%
delta/features.py 19 14 26%
delta/graphics.py 85 66 22%
delta/util.py 108 24 78%
------------------------------------------
TOTAL 896 332 63%
----------------------------------------------------------------------
Ran 19 tests in 8.083s
OK
[htmlpublisher] Archiving HTML reports...
[htmlpublisher] Archiving at PROJECT level /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html to /mnt/data/jenkins/jobs/pydelta-next/htmlreports/Documentation
Recording test results
[Cobertura] Publishing Cobertura coverage report...
[Cobertura] Publishing Cobertura coverage results...
[Cobertura] Cobertura coverage report found.
[Set GitHub commit status (universal)] SUCCESS on repos [GHRepository@6df4a1d4[description=an experimental implementation of Burrow's delta in Python 3,homepage=http://dev.digital-humanities.de/ci/job/pydelta-next/Documentation/index.html,name=pydelta,fork=true,size=2975,milestones={},language=Jupyter Notebook,commits={},responseHeaderFields={null=[HTTP/1.1 200 OK], Access-Control-Allow-Origin=[*], Access-Control-Expose-Headers=[ETag, Link, Retry-After, X-GitHub-OTP, X-RateLimit-Limit, X-RateLimit-Remaining, X-RateLimit-Reset, X-OAuth-Scopes, X-Accepted-OAuth-Scopes, X-Poll-Interval], Cache-Control=[private, max-age=60, s-maxage=60], Content-Encoding=[gzip], Content-Security-Policy=[default-src 'none'], Content-Type=[application/json; charset=utf-8], Date=[Thu, 25 Jan 2018 13:33:03 GMT], ETag=[W/"55a70ba8a53cd2161e221ec037ba6bb6"], Last-Modified=[Mon, 04 Dec 2017 14:32:11 GMT], OkHttp-Received-Millis=[1516887183587], OkHttp-Response-Source=[CONDITIONAL_CACHE 200], OkHttp-Selected-Protocol=[http/1.1], OkHttp-Sent-Millis=[1516887183376], Server=[GitHub.com], Status=[200 OK], Strict-Transport-Security=[max-age=31536000; includeSubdomains; preload], Transfer-Encoding=[chunked], Vary=[Accept, Authorization, Cookie, X-GitHub-OTP], X-Accepted-OAuth-Scopes=[repo], X-Content-Type-Options=[nosniff], X-Frame-Options=[deny], X-GitHub-Media-Type=[github.v3; format=json], X-GitHub-Request-Id=[9FFA:218D:8F46E1:13892E7:5A69DC8F], X-OAuth-Scopes=[admin:repo_hook, repo, repo:status], X-RateLimit-Limit=[5000], X-RateLimit-Remaining=[4949], X-RateLimit-Reset=[1516887322], X-Runtime-rack=[0.102483], X-XSS-Protection=[1; mode=block]},url=https://api.github.com/repos/cophi-wue/pydelta,id=84633971]] (sha:f073313) with context:pydelta-next
Setting commit status on GitHub for https://github.com/cophi-wue/pydelta/commit/f07331328a302cdbb866b01a29c4361bcc5a17c9
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
Notifying upstream projects of job completion
No emails were triggered.
Finished: SUCCESS
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