Console Output

Started by GitHub push by thvitt
Running as SYSTEM
Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/pydelta-next
The recommended git tool is: NONE
using credential Github
 > /usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > /usr/bin/git config remote.origin.url https://github.com/cophi-wue/pydelta # timeout=10
Fetching upstream changes from https://github.com/cophi-wue/pydelta
 > /usr/bin/git --version # timeout=10
 > git --version # 'git version 2.11.0'
using GIT_ASKPASS to set credentials 
 > /usr/bin/git fetch --tags --progress -- https://github.com/cophi-wue/pydelta +refs/heads/*:refs/remotes/origin/* # timeout=10
 > /usr/bin/git rev-parse refs/remotes/origin/next^{commit} # timeout=10
Checking out Revision 31bf8a717e18d0106e7e4b0b6932fb3404594ac0 (refs/remotes/origin/next)
 > /usr/bin/git config core.sparsecheckout # timeout=10
 > /usr/bin/git checkout -f 31bf8a717e18d0106e7e4b0b6932fb3404594ac0 # timeout=10
Commit message: "Fixed some warnings and deprecations."
 > /usr/bin/git rev-list --no-walk f07331328a302cdbb866b01a29c4361bcc5a17c9 # timeout=10
[Checks API] No suitable checks publisher found.
No emails were triggered.
[pydelta-next] $ /usr/bin/python3 /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenv.py /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259
Using base prefix '/usr'
New python executable in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/bin/python3
Also creating executable in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/bin/python
Installing setuptools, pip, wheel...done.
[pydelta-next] $ /bin/sh -xe /tmp/shiningpanda5255532187913836805.sh
+ pip install -U pip
DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
Requirement already up-to-date: pip in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (20.2.3)
+ pip install -U numpy scipy Cython
DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
Collecting numpy
  Downloading numpy-1.18.5-cp35-cp35m-manylinux1_x86_64.whl (19.9 MB)
Collecting scipy
  Downloading scipy-1.4.1-cp35-cp35m-manylinux1_x86_64.whl (26.0 MB)
Collecting Cython
  Downloading Cython-0.29.21-cp35-cp35m-manylinux1_x86_64.whl (1.9 MB)
Installing collected packages: numpy, scipy, Cython
Successfully installed Cython-0.29.21 numpy-1.18.5 scipy-1.4.1
+ pip install -U -r requirements.txt
DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
Obtaining file:///mnt/data/jenkins/workspace/pydelta-next (from -r requirements.txt (line 1))
Requirement already up-to-date: Cython in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from -r requirements.txt (line 3)) (0.29.21)
Collecting pytest
  Downloading pytest-6.1.1-py3-none-any.whl (272 kB)
Collecting Sphinx
  Downloading Sphinx-3.2.1-py3-none-any.whl (2.9 MB)
Collecting ipykernel
  Downloading ipykernel-5.3.4-py3-none-any.whl (120 kB)
Collecting nbsphinx
  Downloading nbsphinx-0.7.1-py3-none-any.whl (24 kB)
Requirement already satisfied, skipping upgrade: scipy>=0.14.0 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from delta==2.0.0.dev1->-r requirements.txt (line 1)) (1.4.1)
Collecting matplotlib>=1.3.1
  Downloading matplotlib-3.0.3-cp35-cp35m-manylinux1_x86_64.whl (13.0 MB)
Requirement already satisfied, skipping upgrade: numpy>=1.8.1 in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from delta==2.0.0.dev1->-r requirements.txt (line 1)) (1.18.5)
Collecting pandas>=0.13.1
  Downloading pandas-0.25.3-cp35-cp35m-manylinux1_x86_64.whl (10.3 MB)
Collecting scikit-learn>=0.16.0
  Downloading scikit_learn-0.22.2.post1-cp35-cp35m-manylinux1_x86_64.whl (7.0 MB)
Collecting regex
  Downloading regex-2020.9.27.tar.gz (690 kB)
Collecting py>=1.8.2
  Using cached py-1.9.0-py2.py3-none-any.whl (99 kB)
Collecting pluggy<1.0,>=0.12
  Using cached pluggy-0.13.1-py2.py3-none-any.whl (18 kB)
Collecting pathlib2>=2.2.0; python_version < "3.6"
  Downloading pathlib2-2.3.5-py2.py3-none-any.whl (18 kB)
Collecting toml
  Using cached toml-0.10.1-py2.py3-none-any.whl (19 kB)
Collecting importlib-metadata>=0.12; python_version < "3.8"
  Using cached importlib_metadata-2.0.0-py2.py3-none-any.whl (31 kB)
Collecting packaging
  Using cached packaging-20.4-py2.py3-none-any.whl (37 kB)
Collecting attrs>=17.4.0
  Downloading attrs-20.2.0-py2.py3-none-any.whl (48 kB)
Collecting iniconfig
  Downloading iniconfig-1.0.1-py3-none-any.whl (4.2 kB)
Collecting sphinxcontrib-jsmath
  Using cached sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB)
Requirement already satisfied, skipping upgrade: setuptools in /mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages (from Sphinx->-r requirements.txt (line 9)) (50.3.0)
Collecting docutils>=0.12
  Downloading docutils-0.16-py2.py3-none-any.whl (548 kB)
Collecting babel>=1.3
  Downloading Babel-2.8.0-py2.py3-none-any.whl (8.6 MB)
Collecting requests>=2.5.0
  Using cached requests-2.24.0-py2.py3-none-any.whl (61 kB)
Collecting imagesize
  Downloading imagesize-1.2.0-py2.py3-none-any.whl (4.8 kB)
Collecting sphinxcontrib-qthelp
  Downloading sphinxcontrib_qthelp-1.0.3-py2.py3-none-any.whl (90 kB)
Collecting sphinxcontrib-serializinghtml
  Downloading sphinxcontrib_serializinghtml-1.1.4-py2.py3-none-any.whl (89 kB)
Collecting Pygments>=2.0
  Downloading Pygments-2.7.1-py3-none-any.whl (944 kB)
Collecting sphinxcontrib-devhelp
  Downloading sphinxcontrib_devhelp-1.0.2-py2.py3-none-any.whl (84 kB)
Collecting sphinxcontrib-applehelp
  Downloading sphinxcontrib_applehelp-1.0.2-py2.py3-none-any.whl (121 kB)
Collecting sphinxcontrib-htmlhelp
  Downloading sphinxcontrib_htmlhelp-1.0.3-py2.py3-none-any.whl (96 kB)
Collecting Jinja2>=2.3
  Downloading Jinja2-2.11.2-py2.py3-none-any.whl (125 kB)
Collecting snowballstemmer>=1.1
  Downloading snowballstemmer-2.0.0-py2.py3-none-any.whl (97 kB)
Collecting alabaster<0.8,>=0.7
  Using cached alabaster-0.7.12-py2.py3-none-any.whl (14 kB)
Collecting jupyter-client
  Downloading jupyter_client-6.1.7-py3-none-any.whl (108 kB)
Collecting tornado>=4.2
  Downloading tornado-6.0.4.tar.gz (496 kB)
Collecting traitlets>=4.1.0
  Downloading traitlets-4.3.3-py2.py3-none-any.whl (75 kB)
Collecting ipython>=5.0.0
  Downloading ipython-7.9.0-py3-none-any.whl (775 kB)
Collecting nbconvert!=5.4
  Downloading nbconvert-5.6.1-py2.py3-none-any.whl (455 kB)
Collecting nbformat
  Downloading nbformat-5.0.7-py3-none-any.whl (170 kB)
Collecting python-dateutil>=2.1
  Using cached python_dateutil-2.8.1-py2.py3-none-any.whl (227 kB)
Collecting kiwisolver>=1.0.1
  Downloading kiwisolver-1.1.0-cp35-cp35m-manylinux1_x86_64.whl (90 kB)
Collecting pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1
  Using cached pyparsing-2.4.7-py2.py3-none-any.whl (67 kB)
Collecting cycler>=0.10
  Using cached cycler-0.10.0-py2.py3-none-any.whl (6.5 kB)
Collecting pytz>=2017.2
  Using cached pytz-2020.1-py2.py3-none-any.whl (510 kB)
Collecting joblib>=0.11
  Downloading joblib-0.14.1-py2.py3-none-any.whl (294 kB)
Collecting six
  Using cached six-1.15.0-py2.py3-none-any.whl (10 kB)
Collecting zipp>=0.5
  Downloading zipp-1.2.0-py2.py3-none-any.whl (4.8 kB)
Collecting chardet<4,>=3.0.2
  Using cached chardet-3.0.4-py2.py3-none-any.whl (133 kB)
Collecting certifi>=2017.4.17
  Using cached certifi-2020.6.20-py2.py3-none-any.whl (156 kB)
Collecting idna<3,>=2.5
  Using cached idna-2.10-py2.py3-none-any.whl (58 kB)
Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1
  Using cached urllib3-1.25.10-py2.py3-none-any.whl (127 kB)
Collecting MarkupSafe>=0.23
  Using cached MarkupSafe-1.1.1-cp35-cp35m-manylinux1_x86_64.whl (27 kB)
Collecting pyzmq>=13
  Downloading pyzmq-19.0.2-cp35-cp35m-manylinux1_x86_64.whl (1.0 MB)
Collecting jupyter-core>=4.6.0
  Downloading jupyter_core-4.6.3-py2.py3-none-any.whl (83 kB)
Collecting ipython-genutils
  Using cached ipython_genutils-0.2.0-py2.py3-none-any.whl (26 kB)
Collecting decorator
  Using cached decorator-4.4.2-py2.py3-none-any.whl (9.2 kB)
Collecting backcall
  Downloading backcall-0.2.0-py2.py3-none-any.whl (11 kB)
Collecting jedi>=0.10
  Downloading jedi-0.17.2-py2.py3-none-any.whl (1.4 MB)
Collecting pexpect; sys_platform != "win32"
  Using cached pexpect-4.8.0-py2.py3-none-any.whl (59 kB)
Collecting prompt-toolkit<2.1.0,>=2.0.0
  Downloading prompt_toolkit-2.0.10-py3-none-any.whl (340 kB)
Collecting pickleshare
  Using cached pickleshare-0.7.5-py2.py3-none-any.whl (6.9 kB)
Collecting entrypoints>=0.2.2
  Downloading entrypoints-0.3-py2.py3-none-any.whl (11 kB)
Collecting mistune<2,>=0.8.1
  Using cached mistune-0.8.4-py2.py3-none-any.whl (16 kB)
Collecting testpath
  Downloading testpath-0.4.4-py2.py3-none-any.whl (163 kB)
Processing /mnt/data/jenkins/.cache/pip/wheels/39/01/56/f1b08a6275acc59e846fa4c1e1b65dbc1919f20157d9e66c20/pandocfilters-1.4.2-cp35-none-any.whl
Collecting bleach
  Downloading bleach-3.2.1-py2.py3-none-any.whl (145 kB)
Collecting defusedxml
  Downloading defusedxml-0.6.0-py2.py3-none-any.whl (23 kB)
Collecting jsonschema!=2.5.0,>=2.4
  Using cached jsonschema-3.2.0-py2.py3-none-any.whl (56 kB)
Collecting parso<0.8.0,>=0.7.0
  Downloading parso-0.7.1-py2.py3-none-any.whl (109 kB)
Collecting ptyprocess>=0.5
  Using cached ptyprocess-0.6.0-py2.py3-none-any.whl (39 kB)
Collecting wcwidth
  Downloading wcwidth-0.2.5-py2.py3-none-any.whl (30 kB)
Collecting webencodings
  Using cached webencodings-0.5.1-py2.py3-none-any.whl (11 kB)
Collecting pyrsistent>=0.14.0
  Downloading pyrsistent-0.17.3.tar.gz (106 kB)
Building wheels for collected packages: regex, tornado, pyrsistent
  Building wheel for regex (setup.py): started
  Building wheel for regex (setup.py): finished with status 'done'
  Created wheel for regex: filename=regex-2020.9.27-cp35-cp35m-linux_x86_64.whl size=581557 sha256=27faef39cf49f1870e15b467670980393b41f5db5529b0aa6578af10fb840030
  Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/3f/e1/38/f13210ee0427566ef94b10de1507e94ee5e63ed3a5015d26bc
  Building wheel for tornado (setup.py): started
  Building wheel for tornado (setup.py): finished with status 'done'
  Created wheel for tornado: filename=tornado-6.0.4-cp35-cp35m-linux_x86_64.whl size=427818 sha256=b074fc364d063b8d365af013ca5fcf01fde3b1bf988502a10c6fb360666ef9db
  Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/68/3c/1e/fd5ff3580fd107e6785d42a2d7e690396d1cefa44813561c29
  Building wheel for pyrsistent (setup.py): started
  Building wheel for pyrsistent (setup.py): finished with status 'done'
  Created wheel for pyrsistent: filename=pyrsistent-0.17.3-cp35-cp35m-linux_x86_64.whl size=97648 sha256=c424d766f836f7aa72d68e223d4674784ed72653d521db0b80922a59ffa685b4
  Stored in directory: /mnt/data/jenkins/.cache/pip/wheels/6e/ce/d7/a149c2d007203e74294d9d641ea6a6504a3d71a0540790e452
Successfully built regex tornado pyrsistent
Installing collected packages: py, zipp, importlib-metadata, pluggy, six, pathlib2, toml, pyparsing, packaging, attrs, iniconfig, pytest, sphinxcontrib-jsmath, docutils, pytz, babel, chardet, certifi, idna, urllib3, requests, imagesize, sphinxcontrib-qthelp, sphinxcontrib-serializinghtml, Pygments, sphinxcontrib-devhelp, sphinxcontrib-applehelp, sphinxcontrib-htmlhelp, MarkupSafe, Jinja2, snowballstemmer, alabaster, Sphinx, pyzmq, ipython-genutils, decorator, traitlets, jupyter-core, python-dateutil, tornado, jupyter-client, backcall, parso, jedi, ptyprocess, pexpect, wcwidth, prompt-toolkit, pickleshare, ipython, ipykernel, entrypoints, mistune, testpath, pandocfilters, pyrsistent, jsonschema, nbformat, webencodings, bleach, defusedxml, nbconvert, nbsphinx, kiwisolver, cycler, matplotlib, pandas, joblib, scikit-learn, regex, delta
  Running setup.py develop for delta
Successfully installed Jinja2-2.11.2 MarkupSafe-1.1.1 Pygments-2.7.1 Sphinx-3.2.1 alabaster-0.7.12 attrs-20.2.0 babel-2.8.0 backcall-0.2.0 bleach-3.2.1 certifi-2020.6.20 chardet-3.0.4 cycler-0.10.0 decorator-4.4.2 defusedxml-0.6.0 delta docutils-0.16 entrypoints-0.3 idna-2.10 imagesize-1.2.0 importlib-metadata-2.0.0 iniconfig-1.0.1 ipykernel-5.3.4 ipython-7.9.0 ipython-genutils-0.2.0 jedi-0.17.2 joblib-0.14.1 jsonschema-3.2.0 jupyter-client-6.1.7 jupyter-core-4.6.3 kiwisolver-1.1.0 matplotlib-3.0.3 mistune-0.8.4 nbconvert-5.6.1 nbformat-5.0.7 nbsphinx-0.7.1 packaging-20.4 pandas-0.25.3 pandocfilters-1.4.2 parso-0.7.1 pathlib2-2.3.5 pexpect-4.8.0 pickleshare-0.7.5 pluggy-0.13.1 prompt-toolkit-2.0.10 ptyprocess-0.6.0 py-1.9.0 pyparsing-2.4.7 pyrsistent-0.17.3 pytest-6.1.1 python-dateutil-2.8.1 pytz-2020.1 pyzmq-19.0.2 regex-2020.9.27 requests-2.24.0 scikit-learn-0.22.2.post1 six-1.15.0 snowballstemmer-2.0.0 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-1.0.3 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.4 testpath-0.4.4 toml-0.10.1 tornado-6.0.4 traitlets-4.3.3 urllib3-1.25.10 wcwidth-0.2.5 webencodings-0.5.1 zipp-1.2.0
+ ./setup.py sdist bdist
running sdist
running egg_info
writing top-level names to delta.egg-info/top_level.txt
writing requirements to delta.egg-info/requires.txt
writing dependency_links to delta.egg-info/dependency_links.txt
writing delta.egg-info/PKG-INFO
reading manifest file 'delta.egg-info/SOURCES.txt'
writing manifest file 'delta.egg-info/SOURCES.txt'
running check
warning: check: missing required meta-data: url

warning: check: missing meta-data: if 'author' supplied, 'author_email' must be supplied too

creating delta-2.0.0.dev1
creating delta-2.0.0.dev1/delta
creating delta-2.0.0.dev1/delta.egg-info
creating delta-2.0.0.dev1/test
copying files to delta-2.0.0.dev1...
copying README.rst -> delta-2.0.0.dev1
copying setup.cfg -> delta-2.0.0.dev1
copying setup.py -> delta-2.0.0.dev1
copying delta/__init__.py -> delta-2.0.0.dev1/delta
copying delta/cluster.py -> delta-2.0.0.dev1/delta
copying delta/corpus.py -> delta-2.0.0.dev1/delta
copying delta/deltas.py -> delta-2.0.0.dev1/delta
copying delta/experiments.py -> delta-2.0.0.dev1/delta
copying delta/features.py -> delta-2.0.0.dev1/delta
copying delta/graphics.py -> delta-2.0.0.dev1/delta
copying delta/util.py -> delta-2.0.0.dev1/delta
copying delta.egg-info/PKG-INFO -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/SOURCES.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/dependency_links.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/requires.txt -> delta-2.0.0.dev1/delta.egg-info
copying delta.egg-info/top_level.txt -> delta-2.0.0.dev1/delta.egg-info
copying test/test_issue6.py -> delta-2.0.0.dev1/test
Writing delta-2.0.0.dev1/setup.cfg
Creating tar archive
removing 'delta-2.0.0.dev1' (and everything under it)
running bdist
running bdist_dumb
running build
running build_py
copying delta/corpus.py -> build/lib/delta
copying delta/cluster.py -> build/lib/delta
copying delta/util.py -> build/lib/delta
copying delta/deltas.py -> build/lib/delta
installing to build/bdist.linux-x86_64/dumb
running install
running install_lib
creating build/bdist.linux-x86_64/dumb
creating build/bdist.linux-x86_64/dumb/mnt
creating build/bdist.linux-x86_64/dumb/mnt/data
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages
creating build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/features.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/graphics.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/experiments.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/corpus.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/cluster.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/util.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/deltas.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
copying build/lib/delta/__init__.py -> build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/features.py to features.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/graphics.py to graphics.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/experiments.py to experiments.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/corpus.py to corpus.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/cluster.py to cluster.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/util.py to util.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/deltas.py to deltas.cpython-35.pyc
byte-compiling build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta/__init__.py to __init__.cpython-35.pyc
running install_egg_info
Copying delta.egg-info to build/bdist.linux-x86_64/dumb/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/delta-2.0.0.dev1-py3.5.egg-info
running install_scripts
Creating tar archive
removing 'build/bdist.linux-x86_64/dumb' (and everything under it)
+ ./setup.py build_sphinx
running build_sphinx
Running Sphinx v3.2.1
WARNING: html_static_path entry '_static' does not exist
loading pickled environment... failed
failed: Can't get attribute 'mygettext' on <module 'sphinx.locale' from '/mnt/data/jenkins/shiningpanda/jobs/229ceee7/virtualenvs/5b616259/lib/python3.5/site-packages/sphinx/locale/__init__.py'>
loading intersphinx inventory from http://docs.python.org/objects.inv...
loading intersphinx inventory from http://pandas.pydata.org/pandas-docs/stable/objects.inv...
intersphinx inventory has moved: http://docs.python.org/objects.inv -> https://docs.python.org/3/objects.inv
intersphinx inventory has moved: http://pandas.pydata.org/pandas-docs/stable/objects.inv -> https://pandas.pydata.org/pandas-docs/stable/objects.inv
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 9 source files that are out of date
updating environment: [new config] 9 added, 0 changed, 0 removed
reading sources... [ 11%] CustomizingPipeline
reading sources... [ 22%] GettingStarted
reading sources... [ 33%] README
reading sources... [ 44%] README-branch
reading sources... [ 55%] concept
reading sources... [ 66%] delta
KMedoids clustering not available.
You need a patched scikit-learn, see README.txt
reading sources... [ 77%] index
reading sources... [ 88%] modules
reading sources... [100%] refactoring-notes

/mnt/data/jenkins/workspace/pydelta-next/delta/__init__.py:35: UserWarning: KMedoidsClustering not available
  warn("KMedoidsClustering not available")
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:48: WARNING: File not found: 'delta.html#delta.corpus.Corpus'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:346: WARNING: File not found: 'delta.html#corpus.Corpus.relative_frequencies'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:346: WARNING: File not found: 'delta.html#corpus.Corpus.get_mfw_table'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:379: WARNING: File not found: 'delta.html#deltas.DistanceMatrix'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:637: WARNING: File not found: 'delta.html#graph.Dendrogram'
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:637: WARNING: File not found: 'delta.html#corpus.DocumentDescriber'
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:67: WARNING: Unknown interpreted text role "function".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.tokenize:3: WARNING: Unknown interpreted text role "param".
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.metadata:3: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.distance:11: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction.iterate_distance:13: WARNING: Inline strong start-string without end-string.
/mnt/data/jenkins/workspace/pydelta-next/delta/graphics.py:docstring of delta.graphics.Dendrogram:33: WARNING: Unknown interpreted text role "module".
WARNING: __all__ should be a list of strings, not [<class 'delta.corpus.Corpus'>, <class 'delta.corpus.FeatureGenerator'>, regex.Regex('\\p{L}+', flags=regex.V0), regex.Regex("\\b(\\p{L}[\\p{L}'’]*?|[\\p{L}'’]*?\\p{L})\\b", flags=regex.V0 | regex.W), <delta.deltas._FunctionRegistry object at 0x7f314bd19be0>, <class 'delta.deltas.Normalization'>, <function normalization at 0x7f314bacf7b8>, <class 'delta.deltas.DeltaFunction'>, <class 'delta.deltas.PDistDeltaFunction'>, <class 'delta.deltas.MetricDeltaFunction'>, <class 'delta.deltas.CompositeDeltaFunction'>, <class 'delta.cluster.Clustering'>, <class 'delta.cluster.FlatClustering'>, <function get_rfe_features at 0x7f3140c23510>, <class 'delta.graphics.Dendrogram'>] (in module delta) -- ignoring __all__
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:9: WARNING: Unexpected indentation.
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst:12: WARNING: Block quote ends without a blank line; unexpected unindent.
looking for now-outdated files... none found
pickling environment... done
checking consistency... /mnt/data/jenkins/workspace/pydelta-next/docs/README-branch.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/modules.rst: WARNING: document isn't included in any toctree
/mnt/data/jenkins/workspace/pydelta-next/docs/refactoring-notes.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [ 11%] CustomizingPipeline
writing output... [ 22%] GettingStarted
writing output... [ 33%] README
writing output... [ 44%] README-branch
writing output... [ 55%] concept
writing output... [ 66%] delta
writing output... [ 77%] index
writing output... [ 88%] modules
writing output... [100%] refactoring-notes

/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:346: WARNING: 'any' reference target not found: the :math:`n
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:616: WARNING: undefined label: /delta.rst#cluster.clustering (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/GettingStarted.ipynb:803: WARNING: undefined label: /delta.rst#cluster.flatclustering (if the link has no caption the label must precede a section header)
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:31: WARNING: 'any' reference target not found: sort
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:32: WARNING: 'any' reference target not found: reparse_column
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:33: WARNING: 'any' reference target not found: relativize
/mnt/data/jenkins/workspace/pydelta-next/docs/concept.rst:36: WARNING: 'any' reference target not found: normalize
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator:1: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.postprocess_tokens:4: WARNING: 'any' reference target not found: lower_case
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.count_tokens:1: WARNING: 'any' reference target not found: lines
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.FeatureGenerator.process_file:3: WARNING: 'any' reference target not found: filename
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:9: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus:9: WARNING: 'any' reference target not found: subdir
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.new_data:1: WARNING: 'any' reference target not found: DataFrame
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.get_mfw_table:11: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/corpus.py:docstring of delta.corpus.Corpus.top_n:6: WARNING: 'any' reference target not found: mfwords
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.DeltaFunction:16: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.PreprocessingDeltaFunction:7: WARNING: 'any' reference target not found: f
/mnt/data/jenkins/workspace/pydelta-next/delta/deltas.py:docstring of delta.deltas.MetricDeltaFunction:18: WARNING: 'any' reference target not found: fix_symmetry
generating indices...  genindex py-modindexdone
copying notebooks ... [ 50%] CustomizingPipeline.ipynb
copying notebooks ... [100%] GettingStarted.ipynb

highlighting module code... [ 20%] delta.cluster
highlighting module code... [ 40%] delta.corpus
highlighting module code... [ 60%] delta.deltas
highlighting module code... [ 80%] delta.graphics
highlighting module code... [100%] delta.util

writing additional pages...  searchdone
copying images... [ 33%] ../build/sphinx/doctrees/nbsphinx/CustomizingPipeline_22_0.png
copying images... [ 66%] ../build/sphinx/doctrees/nbsphinx/CustomizingPipeline_11_0.png
copying images... [100%] ../build/sphinx/doctrees/nbsphinx/GettingStarted_22_0.png

copying static files... ... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 38 warnings.

The HTML pages are in build/sphinx/html.
+ nosetests
Usage: nosetests [options]

nosetests: error: Error reading config file 'setup.cfg': no such option 'with-xcoverage'
Build step 'Virtualenv Builder' marked build as failure
[htmlpublisher] Archiving HTML reports...
[htmlpublisher] Archiving at PROJECT level /mnt/data/jenkins/workspace/pydelta-next/build/sphinx/html to /mnt/data/jenkins/jobs/pydelta-next/htmlreports/Documentation
Recording test results
ERROR: Step ‘Publish JUnit test result report’ failed: Test reports were found but none of them are new. Did leafNodes run? 
For example, /mnt/data/jenkins/workspace/pydelta-next/nosetests.xml is 2 yr 8 mo old

[Cobertura] Publishing Cobertura coverage report...

[Cobertura] Publishing Cobertura coverage results...

[Cobertura] Cobertura coverage report found.

[Set GitHub commit status (universal)] ERROR on repos [GHRepository@4454911[nodeId=MDEwOlJlcG9zaXRvcnk4NDYzMzk3MQ==,description=an experimental implementation of Burrow's delta in Python 3,homepage=http://dev.digital-humanities.de/ci/job/pydelta-next/Documentation/index.html,name=pydelta,fork=true,archived=false,size=2989,milestones={},language=Jupyter Notebook,commits={},isTemplate=<null>,url=https://api.github.com/repos/cophi-wue/pydelta,id=84633971,nodeId=<null>,createdAt=2017-03-11T08:03:36Z,updatedAt=2020-10-10T16:04:21Z]] (sha:31bf8a7) with context:pydelta-next
Setting commit status on GitHub for https://github.com/cophi-wue/pydelta/commit/31bf8a717e18d0106e7e4b0b6932fb3404594ac0
Started calculate disk usage of build
Finished Calculation of disk usage of build in 0 seconds
Started calculate disk usage of workspace
Finished Calculation of disk usage of workspace in 0 seconds
[Checks API] No suitable checks publisher found.
Notifying upstream projects of job completion
Email was triggered for: Failure - Any
Sending email for trigger: Failure - Any
Not sending mail to unregistered user github@chriselyn.de because your SCM claimed this was associated with a user ID ‘github' which your security realm does not recognize; you may need changes in your SCM plugin
Sending email to: thorsten.vitt@uni-wuerzburg.de
Connection error sending email, retrying once more in 10 seconds...
Connection error sending email, retrying once more in 10 seconds...
Failed after second try sending email
Finished: FAILURE