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Started by user Thorsten Vitt Building remotely on Rechenknecht in workspace /mnt/data/jenkins/workspace/faust-macrogen [ssh-agent] Looking for ssh-agent implementation... [ssh-agent] Exec ssh-agent (binary ssh-agent on a remote machine) $ ssh-agent SSH_AUTH_SOCK=/tmp/ssh-8fhLRWrSzLte/agent.7540 SSH_AGENT_PID=7542 [ssh-agent] Started. $ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_6139310486465273361.key Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_6139310486465273361.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_6139310486465273361.key) [ssh-agent] Using credentials git $ ssh-add /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_1175479285614160020.key Identity added: /mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_1175479285614160020.key (/mnt/data/jenkins/workspace/faust-macrogen@tmp/private_key_1175479285614160020.key) [ssh-agent] Using credentials jenkins (wrzh075.rzhousing.uni-wuerzburg.de) > /usr/bin/git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > /usr/bin/git config remote.origin.url git://github.com/faustedition/faust-macrogen # timeout=10 Fetching upstream changes from git://github.com/faustedition/faust-macrogen > /usr/bin/git --version # timeout=10 using GIT_SSH to set credentials wrzh075.rzhousing.uni-wuerzburg.de > /usr/bin/git fetch --tags --progress git://github.com/faustedition/faust-macrogen +refs/heads/*:refs/remotes/origin/* > /usr/bin/git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > /usr/bin/git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10 Checking out Revision 52b6694bd426429e0b9576bf05e9dc3cf3a51099 (refs/remotes/origin/master) > /usr/bin/git config core.sparsecheckout # timeout=10 > /usr/bin/git checkout -f 52b6694bd426429e0b9576bf05e9dc3cf3a51099 Commit message: "Fixed temp-syn coloring" > /usr/bin/git rev-list --no-walk b1c133ec5d3e96bc5f231b890c5bf60dcb503a0e # timeout=10 > /usr/bin/git remote # timeout=10 > /usr/bin/git submodule init # timeout=10 > /usr/bin/git submodule sync # timeout=10 > /usr/bin/git config --get remote.origin.url # timeout=10 > /usr/bin/git submodule init # timeout=10 > /usr/bin/git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > /usr/bin/git config --get submodule.data.url # timeout=10 > /usr/bin/git config -f .gitmodules --get submodule.data.path # timeout=10 > /usr/bin/git submodule update --init --recursive --remote data $ bash -c "[ -d \$HOME/.pyenv ]" $ bash -c "cd /mnt/data/jenkins/workspace/faust-macrogen && env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv local 2>/dev/null || true" $ bash -c "mkdir \$HOME/.pyenv.lock" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv versions --bare" Updating pyenv... $ bash -c "cd \$HOME/.pyenv && git checkout master && git pull" Already on 'master' Your branch is up-to-date with 'origin/master'. From https://github.com/yyuu/pyenv eee72ee..97f244f master -> origin/master * [new tag] v1.2.6 -> v1.2.6 * [new tag] v1.2.5 -> v1.2.5 Updating eee72ee..97f244f Fast-forward .github/PULL_REQUEST_TEMPLATE.md | 6 +++--- CHANGELOG.md | 12 ++++++++++++ libexec/pyenv---version | 2 +- libexec/pyenv-rehash | 2 +- plugins/python-build/bin/python-build | 13 +++++-------- plugins/python-build/share/python-build/{3.7.0b5 => 3.6.6} | 4 ++-- .../python-build/share/python-build/{3.5.5rc1 => 3.6.6rc1} | 4 ++-- plugins/python-build/share/python-build/3.7.0 | 8 ++++++++ 8 files changed, 34 insertions(+), 17 deletions(-) rename plugins/python-build/share/python-build/{3.7.0b5 => 3.6.6} (51%) rename plugins/python-build/share/python-build/{3.5.5rc1 => 3.6.6rc1} (50%) create mode 100644 plugins/python-build/share/python-build/3.7.0 Updated pyenv. Installing 3.6.6... $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv install 3.6.6" Downloading Python-3.6.6.tar.xz... -> https://www.python.org/ftp/python/3.6.6/Python-3.6.6.tar.xz Installing Python-3.6.6... Installed Python-3.6.6 to /mnt/data/jenkins/.pyenv/versions/3.6.6 Installed 3.6.6. $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv exec pip list" Installing pipenv... $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv exec pip install pipenv" Collecting pipenv Downloading https://files.pythonhosted.org/packages/eb/64/9b2747d54f2008ac3dfe86c0b1c8ec126042726fd8a540d5208d26732701/pipenv-2018.7.1-py3-none-any.whl (5.0MB) Requirement already satisfied: pip>=9.0.1 in ./.pyenv/versions/3.6.6/lib/python3.6/site-packages (from pipenv) (10.0.1) Collecting virtualenv-clone>=0.2.5 (from pipenv) Using cached https://files.pythonhosted.org/packages/6d/c2/dccb5ccf599e0c5d1eea6acbd058af7a71384f9740179db67a9182a24798/virtualenv_clone-0.3.0-py2.py3-none-any.whl Requirement already satisfied: setuptools>=36.2.1 in ./.pyenv/versions/3.6.6/lib/python3.6/site-packages (from pipenv) (39.0.1) Collecting virtualenv (from pipenv) Using cached https://files.pythonhosted.org/packages/b6/30/96a02b2287098b23b875bc8c2f58071c35d2efe84f747b64d523721dc2b5/virtualenv-16.0.0-py2.py3-none-any.whl Collecting certifi (from pipenv) Using cached https://files.pythonhosted.org/packages/7c/e6/92ad559b7192d846975fc916b65f667c7b8c3a32bea7372340bfe9a15fa5/certifi-2018.4.16-py2.py3-none-any.whl Installing collected packages: virtualenv-clone, virtualenv, certifi, pipenv Successfully installed certifi-2018.4.16 pipenv-2018.7.1 virtualenv-16.0.0 virtualenv-clone-0.3.0 You are using pip version 10.0.1, however version 18.0 is available. You should consider upgrading via the 'pip install --upgrade pip' command. Installed pipenv. $ bash -c "env PYENV_ROOT\=\$HOME/.pyenv PYENV_VERSION\=3.6.6 \$HOME/.pyenv/bin/pyenv rehash" $ bash -c "rm -rf \$HOME/.pyenv.lock" [faust-macrogen] $ /bin/sh -xe /tmp/jenkins1552332456643253511.sh + pipenv install Creating a virtualenv for this project... Pipfile: /mnt/data/jenkins/workspace/faust-macrogen/Pipfile Using /mnt/data/jenkins/.pyenv/versions/3.6.5/bin/python3.6m (3.6.5) to create virtualenv... Running virtualenv with interpreter /mnt/data/jenkins/.pyenv/versions/3.6.5/bin/python3.6m Using base prefix '/mnt/data/jenkins/.pyenv/versions/3.6.5' New python executable in /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/bin/python3.6m Also creating executable in /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/bin/python Installing setuptools, pip, wheel...done. Setting project for faust-macrogen-qJ9hPguf to /mnt/data/jenkins/workspace/faust-macrogen Virtualenv location: /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf Installing dependencies from Pipfile.lock (8f5326)... To activate this project's virtualenv, run pipenv shell. Alternatively, run a command inside the virtualenv with pipenv run. + pipenv run ./main.py /mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility. Expected 96, got 88 return f(*args, **kwds) WARNING datings Skipping row ['Reference', 'Weight']: invalid literal for int() with base 10: 'Weight' INFO datings Reading data to build base graph ... WARNING root Could not fix WA pseudo inscription candidate faust://document/wa/2_II_H.31_alpha (wa_faust: 2_II_H.31_) WARNING root Could not fix WA pseudo inscription candidate faust://document/wa/2_III_H.2_alpha (wa_faust: 2_III_H.2_) ERROR datings Absolute dating without a date: <date xmlns="http://www.faustedition.net/ns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> <comment>Über Rest der Handschrift keine Aussage über Datierung möglich</comment> <source uri="faust://bibliography/bohnenkamp1994">S.322</source> <item uri="faust://inscription/wa/2_I_H.10/i_uebrige"/> </date> at data/xml/macrogenesis/handschriftendatierung_i.xml:115 ERROR datings Absolute dating without a date: <date xmlns="http://www.faustedition.net/ns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> <comment>Über Rest der Handschrift keine Aussage über Datierung möglich</comment> <source uri="faust://bibliography/bohnenkamp1994">S.322</source> <item uri="faust://inscription/wa/2_I_H.10/i_v"/> </date> at data/xml/macrogenesis/handschriftendatierung_i.xml:121 ERROR datings Backwards dating (1827-12-25 .. 1817-12-25), this would have caused a conflict: <date xmlns="http://www.faustedition.net/ns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" notBefore="1827-12-25" notAfter="1817-12-25"> <comment>Datierung auf HS: Weynachten 1827; Am 25.12.1827 . . </comment> <source uri="faust://bibliography/gsa-datenbank"/> <item uri="faust://document/wa/2_I_H.f"/> </date> at data/xml/macrogenesis/handschriftendatierung_i.xml:663 INFO root Removing hertz and temp-syn INFO root Extracted 5 subgraphs with conflicts INFO root Calculating minimum feedback arc set for 5 subgraphs WARNING root Found 19 self loops, will also remove those. Affected nodes: 2 III H.76, 2 III H.76, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.2:1, 2 III H.70, 2 III H.70, 2 III H.70, 2 III H.50c, 2 III H.50c, 2 III H.3a:1, 2 III H.3a:1, 2 II H.22, 2 II H.22, fischer_lamberg: 2_III_H.15 , fischer_lamberg: 2_III_H.15 INFO root Marking 386 conflicting edges for deletion INFO root Building DAG from remaining data INFO root Removed 386 of the original 3146 edges INFO root Augmenting refs with data from graphs INFO root Creating sort order from DAG INFO root Writing target/macrogenesis/help-pre.dot ... Traceback (most recent call last): File "./main.py", line 27, in <module> _main() File "./main.py", line 15, in _main report_help() File "/mnt/data/jenkins/workspace/faust-macrogen/report.py", line 369, in report_help write_dot(graph, str(target / f'help-{name}.dot')) File "/mnt/data/jenkins/workspace/faust-macrogen/visualize.py", line 126, in write_dot agraph.write(dotfilename) File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1219, in write fh = self._get_fh(path, 'w') File "/mnt/data/jenkins/.local/share/virtualenvs/faust-macrogen-qJ9hPguf/lib/python3.6/site-packages/pygraphviz/agraph.py", line 1506, in _get_fh fh = open(path, mode=mode) FileNotFoundError: [Errno 2] No such file or directory: 'target/macrogenesis/help-pre.dot' Build step 'Execute shell' marked build as failure $ ssh-agent -k unset SSH_AUTH_SOCK; unset SSH_AGENT_PID; echo Agent pid 7542 killed; [ssh-agent] Stopped. [BFA] Scanning build for known causes... [BFA] No failure causes found [BFA] Done. 0s Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds Notifying upstream projects of job completion Finished: FAILURE